Vreelandella venusta: EI420_00675
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Entry
EI420_00675 CDS
T05892
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
hvn
Vreelandella venusta
Pathway
hvn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EI420_00675 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvn03400
]
EI420_00675 (uvrA)
DNA repair and recombination proteins [BR:
hvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EI420_00675 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EI420_00675 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_22
BCA_ABC_TP_C
nSTAND3
AAA_23
Viral_helicase1
T2SSE
AAA_21
IIGP
RPS31
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AZM94289
LinkDB
All DBs
Position
complement(146524..149373)
Genome browser
AA seq
949 aa
AA seq
DB search
MDSILVRGARTHNLKQIDVELPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARAGTPRC
PEHGEELEAQTISQMVDQVMNLAEGTRLMLLAPVVKGRKGEHLQLLAELRAQGFVRVQID
GQVLELDDIAPLDKRKKHDISVVVDRFKVRDDIAQRLAESFETAINLADGTAMIHFMDGD
QQDLAFSARFACPVCGYSLSELEPRMFSFNNPAGACPTCDGLGVQQYFDPDKLISHPELS
LAEGVIKGWDRRNIYYFTQLQALAKHYQFELETPWIELASHEREIILNGSGSEQIPFVYV
GDRGRKVTREHAFEGVLPNMQRRYRETESNMVRDDLAKYIAVQPCATCGGSRLRQESRHV
FVDDHNIADIVHLPIGEAWRYFAELSLPGRKGEIADKIVNEIHARLEFLVNVGLDYLNLE
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLKTLERLRDLGNTV
IVVEHDEDAIRAADHVLDIGPGAGVHGGEIVAQGTPQDVMDNPNSLTGQYLSGTREIAVP
PYRIPGNPEKQLVVRGATGNNLQNVTLSLPLGLFIAVTGVSGSGKSTLINGTLMPIAARE
LNRATTLTPAPYQKIEGLDQLDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQEA
RSRGYKPGRFSFNVKGGRCEACQGEGMIKVEMHFLPDIYVPCDVCKGKRYNRETLDIHYK
GKTIHEVLAMTVEDALEFFSPVPAIARRLQTLLDVGLSYIRLGQSATTLSGGEAQRVKLA
RELAKRDTGKTLYILDEPTTGLHFEDIRQLLTVLHRLRDHGNTIVVIEHNLDVIKTADWI
IDLGPEGGSGGGQIIAEGTPEQIAKQSVSHTGHFLAPLLKRGNRAQKTA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggacagcattctggtcaggggtgcacgcacccacaacctcaagcagatcgatgtggag
ctgccccgcgacaaacttatcgtcattaccggcctttctggctcaggtaagtcgtcgctg
gcgttcgatacgctctacgctgagggacaacgccgctatgtggagtcactttccacctat
gcgcgtcagttcctttcgatgatggaaaagcccgatgtagatcacatcgaagggctttca
cctgcgatctctattgagcagaaatccacttcccacaacccacgctctaccgtcggcaca
attaccgagatttacgactacctgcgcctactgttcgcccgggcaggcacaccacgctgt
ccagagcacggcgaagaactggaagcacaaaccatttcccaaatggtcgaccaagtcatg
aacctggccgaaggcaccaggctaatgctgctggcgccggtggtgaaaggccgtaaaggg
gagcacctgcaactgctggcagaattgcgggctcaaggcttcgttcgggtacagattgat
ggccaagtgctagagcttgacgatattgccccgctcgacaagcgcaagaaacacgatatc
agcgtagtggttgaccgttttaaagtacgcgatgatattgcccagcgtctggcagaatcg
tttgaaaccgccattaatctcgccgacggcacggcgatgatccactttatggatggcgac
cagcaagatcttgccttttcggcacgctttgcctgcccggtatgtggctattcgctttct
gaacttgagccgcggatgttttcgttcaacaacccagcgggggcttgccccacctgtgat
ggcttaggcgttcagcaatattttgaccccgacaagttgattagccatccggaactttcg
ctagcagaaggcgtgattaagggctgggatcggcgcaatatttattactttacccaactc
caggcgctggctaaacattaccagtttgagcttgaaacgccatggattgagctggccagc
catgagcgtgagattattttaaatggcagtggcagcgaacaaattccctttgtctatgtg
ggtgaccgtggccgcaaggtaacgcgcgagcacgcctttgagggtgtactacccaatatg
cagcgtcgctatcgggaaaccgaatccaatatggtacgtgacgacttggccaagtatatc
gccgtgcaaccctgcgccacctgtggcggttcgcggctgcgtcaagagtcacgccatgtg
tttgtcgatgaccataacattgccgatattgtgcatttacctattggcgaagcgtggcgc
tactttgccgaactttccctaccgggccgtaaaggcgagattgccgacaagatcgttaac
gaaattcatgctcggctagagtttttggttaatgtagggctcgactacctgaacctggag
cgcagcgctgacacgctatcagggggcgaagcccagcgtatccgtctcgccagccaaatt
ggcgcggggctggtgggtgtgatgtacattctggacgagccctccatcggcctgcaccag
cgggataacgaccgtctgttgaaaaccctggagcgcctacgcgacctgggcaacaccgtg
atcgtggtggagcacgacgaagacgccattcgcgctgcggatcatgtcctcgacatcggt
cctggtgccggagtccatggtggtgaaattgtcgcccaaggtacgccgcaagacgttatg
gacaaccccaattcgctgacgggtcagtacttatccggcacccgagaaattgccgtaccg
ccctaccgtattcccggcaatccggaaaagcagctggtggtgcgtggcgctacgggcaat
aacctgcaaaacgtcacgctcagcctaccgctggggctgtttattgccgttacgggggtt
tccggctcgggcaagtcgacgctgatcaacggcacgctgatgccgattgcagcccgcgag
cttaaccgtgccaccacgcttacccccgcgccttatcaaaaaatcgaaggattagatcag
cttgataaagtgatcgatattgatcagagccctatcggacggacaccccgctccaatcca
gccacctacaccggtattttcacaccgattcgtgagctgttcgcgggcactcaggaagca
cgttcgcggggctacaagccaggccgattcagctttaacgttaaaggcggtcgctgcgaa
gcgtgtcagggcgaaggcatgattaaggtagagatgcacttcctaccggatatttatgtg
ccttgcgatgtgtgtaaaggcaaacgctacaaccgcgaaacgttggatatccactataaa
ggcaaaacgatccacgaagtgctggccatgacggtagaggacgccttggaattcttcagt
ccagtgcctgctatcgctcgtcgtttgcaaaccttgttggatgtgggtctttcctatatc
cgcctagggcaaagtgccactaccctttctggcggtgaagcgcagcgggtcaaactggcc
cgtgagctagccaagcgcgacaccggaaaaacgttatatatattggatgagccaaccact
ggcctgcattttgaggatatccgtcagctactcacggtactccaccggttacgtgatcac
ggcaataccattgtggtgatcgagcacaacctggatgtgatcaaaacggctgactggatt
attgatcttggcccagaaggtggctctggcggtggacaaattattgccgaaggaacaccg
gaacagattgccaagcagagcgtttcccatacagggcatttcctggcgccgttgttaaag
cgtggtaatcgcgcccaaaaaaccgcctag
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