Vreelandella venusta: EI420_01680
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Entry
EI420_01680 CDS
T05892
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hvn
Vreelandella venusta
Pathway
hvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI420_01680 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvn03019
]
EI420_01680 (pnp)
03016 Transfer RNA biogenesis [BR:
hvn03016
]
EI420_01680 (pnp)
Enzymes [BR:
hvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EI420_01680 (pnp)
Messenger RNA biogenesis [BR:
hvn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EI420_01680 (pnp)
Transfer RNA biogenesis [BR:
hvn03016
]
Prokaryotic type
tRNA degradation factors
EI420_01680 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
AZM94471
UniProt:
A0A3Q8WFM7
LinkDB
All DBs
Position
345927..348089
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AA seq
720 aa
AA seq
DB search
MLKEVAVNPVKKTFQYGRSTVTLETGRIARQATGAVMVTMDETVVLCTVVAKKEANPSQS
FFPLSVHYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVIC
TVLSTDRNHDPDIAALLGTSAALGIAGVPFNGPIGAARVGFNEEQGYFLNPTVEELATSE
LDMVVAGTENAVLMVESEAQELLEDEMLGAVLFGHQEMQVAVSAIKELVADAGKPRWDWQ
PAQENIALKTAMADAFEAKVGDAYRITDKMARQDALSALKEEAVAQLAAAEGEEVEGKFS
QDDVKGAFAGLEKRVVRSRVVKGEPRIDGRDNATVRPLAIEVGVLPKTHGSAVFTRGETQ
AIAVATLGTLRDSQLIESLEGERKDRFMLHYNFPPYCVGEAGFMGGPKRREIGHGRLARR
GVQAMLPSEDVFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLV
KDEDGYAVLTDILGDEDHLGDMDFKVAGSEEGVTALQMDIKIEGINEEIMEKALQQAHDA
RLSILAQMNDVISQSRTDVSENAPSMATIKIDPDKIRDVIGKGGATIRKICEDTGASIDL
DDDGTVRIYAEDKAAAKKAIDTVLAITAEAEIGKLYNGKVVRIADFGAFVNIMPGTDGLV
HISQIVAERVNNVRDFLNEGDDVIVKVLDIDNRNRVKLSIKEITEEEKAAFAAAEADVAN
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaggaagtcgccgtgaatccggtaaaaaaaacgtttcaatacggtcgtagcacc
gtcaccctagaaactgggcgtattgctcgccaagccactggcgccgttatggtgaccatg
gatgaaaccgtcgtactgtgtacggtggtggccaaaaaagaagcgaaccccagccagtct
ttcttcccactctcggtacactatcaagagaaaacctacgcagtgggcaagatccccggc
ggcttctttaagcgcgaagggcgtcctaccgagaaagaaacccttacctctcgtctgatt
gatcgtccgattcgtccgctatttccgaaagggtttatgaacgaagtgcaggttatctgt
actgttctatcgactgatcgtaatcatgaccccgatatcgcagccctgctgggcacctca
gcagcgctgggtattgccggtgtgccattcaatggcccgattggcgcggcacgtgtgggc
tttaatgaagagcagggctacttcctaaacccaaccgtcgaagagctggctacctcagaa
ctagacatggttgttgccggtaccgaaaacgccgtattgatggtggagtcggaagctcag
gaactgcttgaagatgaaatgcttggtgccgtgctgttcggtcaccaggaaatgcaggta
gctgtcagcgcgattaaagagctggtcgctgacgctggcaaaccgcgttgggattggcag
cccgctcaagagaatatcgcactgaaaacagccatggccgatgcttttgaagccaaggta
ggtgatgcttatcgcattacggacaaaatggctcgccaagatgcgctgtcagcgctgaaa
gaggaagcggttgcccagttggctgctgctgaaggcgaagaagtagaaggtaaattcagc
caagatgacgtgaaaggtgcgtttgcgggccttgagaagcgcgttgtacgctctcgtgtg
gtaaaaggcgagccgcgtattgatgggcgcgacaatgccactgtacgtcctctagcgatt
gaggtgggtgtcctgcctaagacacacggttcggcggtgtttacccgtggcgagacccag
gctattgccgttgcgaccttgggcaccctgcgcgactcacagctgatcgaatccctggaa
ggcgagcgtaaagaccgctttatgctgcactacaacttccctccttactgtgtcggcgaa
gcaggctttatgggcgggccgaagcgtcgtgaaatcggtcatggccgtttagcgcgccgt
ggcgttcaagcgatgctgccgtcagaagacgtgttcccctataccatccgtgtagtatcg
gaaatcactgaatctaacggttctagctccatggcgtcagtgtgtggctcctcgctcgca
ctgatggatgccggtgtgccattaaaagccccggtggcaggtattgccatgggcttagtg
aaagatgaagacggctatgcggtattgactgatatcctgggtgacgaagaccacctgggc
gatatggacttcaaagttgccggttctgaagagggcgttactgctctgcagatggatatt
aagattgagggcatcaatgaagagatcatggagaaagcgctgcagcaagcccatgatgct
cgccttagtatcctcgctcagatgaacgacgtgatcagtcaaagtcgtacggacgtatcg
gaaaatgcgccgtccatggcgacgattaaaatcgatccggacaagatccgtgatgtgatt
ggtaaaggtggcgcaacgattcgtaaaatttgcgaagacaccggtgcctctattgatctg
gatgatgatggcaccgtgcgtatctacgccgaagataaagcagccgccaaaaaagctatt
gataccgtgctggcaattaccgcagaagcggaaattggtaagctgtataacggtaaagta
gttcgcattgctgactttggtgctttcgttaatatcatgccgggtaccgacggcttggtg
catatctcacaaattgttgccgagcgcgttaacaacgtgcgcgacttcttaaatgaaggc
gatgatgtgattgtgaaggtattggatatcgacaaccgcaatcgtgtgaagctctcaatc
aaagagatcaccgaggaagagaaagcagcttttgccgctgccgaagcggacgtcgctaac
taa
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