Vreelandella venusta: EI420_02605
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Entry
EI420_02605 CDS
T05892
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hvn
Vreelandella venusta
Pathway
hvn03030
DNA replication
hvn03430
Mismatch repair
hvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EI420_02605
03430 Mismatch repair
EI420_02605
03440 Homologous recombination
EI420_02605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvn03032
]
EI420_02605
03400 DNA repair and recombination proteins [BR:
hvn03400
]
EI420_02605
Enzymes [BR:
hvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EI420_02605
DNA replication proteins [BR:
hvn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EI420_02605
DNA repair and recombination proteins [BR:
hvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EI420_02605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AZM94639
LinkDB
All DBs
Position
546628..550131
Genome browser
AA seq
1167 aa
AA seq
DB search
MTVPFVHLRLHSEYSLVDGLVKLKSLVSTTAERGMPALALTDEANLFGLVKFYKAAQGAG
LKPIIGSDLWLYNPHDEAHPYRITLLAMNDVGYRNLTELISKGWTDGQRQGRAILDKQWV
LAQSEGLIALSGGRDGEIGRHLLSDHEREARELLEEWQQAFPDRFYLELIRTGRPLEEDC
VHASVKLAIESNIPVVATNDVRFLEREDFWAHETRVAIGEGKALDDPRRERRYTEEQYLK
SPEEMAALFADIPEALENSVMIAERCSVDVRLGEIFLPEFEIPEGMTQDEFFRKVSHDGL
TERLDFLFPVEQYPRDSDAYREIDQRYRDRLEFELNVIIQMGFPGYFLIVMDFIQWAKDN
NVPVGPGRGSGAGSLVAYAQKITDLDPIGYDLLFERFLNPERVSMPDFDVDFCMEKRDKV
IEYVANRYGRNAVSQIVTFGTMAAKAVVRDVARAQGRPYSLGDKLSKLIPFEVGMTLAKA
IEQEPALKEFIGNDEEAEEIWEMALKLEGTTRGTGKHAGGVVIAPTKLTDFSPLLCDEDG
SGLVVQFDKNDIEDAGLVKFDFLGLRTLTIIDWALEMVDKVRGVNGQAPLNIDAIPLDDN
KTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINR
KHGRSEVSYPHPDYQHDLLKPVLSPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGK
KKPEEMAKQRSGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWL
KAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLKLTVTPPDVNVGGYKFTVDTEGRVVYG
LGAIRGVGEGPIGAIVEARRTDGPFKDLFDFCRRIDPKRMNKRTLEALIRSGALDNLGPN
RAVLAAAMEDALKAAAQNHANQNLGMLDMFGDAFTAEEDETDPYAEYRSAREWTDRERLS
GEKDTLGLYLTGHPIDEYERELKRFVSTRISDLKASREPQRVAGLVVAMRTMKSKRGDTM
AFITLDDRTGRIEASLFGELFEQLRGQIESDQVIIVEGEVSNDDFSGGLRLRGKDVTPMV
TARIRYGEAVELALDAEQINGRLVDSLRESLTPYRDTDGLPVRLQYRHSAAVGWLALAEE
WKVAPSDDLLLALRDVQGQVGVQLRYR
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgacggttccgtttgttcatctacgtttgcacagtgaatactccctggttgatggcttg
gtaaaactcaagtcactggtcagtaccaccgctgagcgcgggatgccggctctggcgtta
accgatgaagctaacttgtttggtttggttaagttctacaaagcggcgcagggcgctggc
cttaagcccatcatcggtagcgacttatggttatataacccccatgatgaggcccaccca
tatcgtattacgctgctagcgatgaacgatgttggttaccgcaatctcactgaattgatt
tctaaagggtggaccgatggccagcgccaagggcgcgctattctggataaacagtgggtg
ctagcgcaaagcgaaggactgattgcgctatcaggcggacgtgacggcgagataggtcgc
cacttactgtctgatcatgagcgcgaagcccgagagctgttagaggagtggcagcaggcc
tttccagaccgtttttacttggagttaattcgcaccgggcggccacttgaagaagattgc
gttcacgcgagtgtgaagttggcgattgagtcgaatatccccgtggtcgcgaccaatgac
gtgcgctttttagagcgggaggacttttgggcgcacgaaacccgagttgccatcggtgaa
ggtaaggccttggatgatccgcgccgtgagcgacgctacaccgaagagcagtacctaaaa
agtcctgaggagatggcagcactgtttgctgacattcctgaggcgcttgagaacagcgtt
atgatcgccgagcggtgtagcgttgatgtacggttgggcgaaattttcctgcctgagttc
gaaattcccgaagggatgactcaggatgagtttttccgcaaagtctcccatgacggcctc
actgagcggttagattttctattccctgttgaacagtacccgcgcgatagcgatgcctac
cgagaaattgatcaacgctaccgtgacaggcttgagtttgagctcaacgttattatccaa
atgggctttcctggttacttcctgatcgtgatggactttatccagtgggccaaggataac
aacgtgccagtcggtccagggcgtggttccggtgcgggctcattagtggcttacgcgcaa
aaaattaccgatcttgatcctattggctacgatctgctgttcgaacgctttcttaaccct
gagcgtgtctccatgcccgactttgacgtcgacttttgcatggaaaagcgcgacaaagtg
attgagtacgtcgcgaaccgctatggtcgcaatgcggtatctcagattgtcacctttggc
accatggctgcaaaagcggtggtgcgcgatgtggcgcgcgcccaggggcggccttactct
ttgggcgataaactctctaagctgattccctttgaagtgggtatgacactggctaaagcg
atagagcaagagccagcactgaaagagtttatcggcaacgacgaagaagccgaagagatc
tgggaaatggccctcaagctagagggcaccacccgggggaccggtaagcacgcggggggc
gttgttatcgcgcccaccaagctgaccgatttctcgccgctgttgtgcgatgaagatggc
tccggtcttgtggtgcagttcgataaaaacgacatcgaagacgcggggctagtaaagttc
gactttttgggcttgcgtacgctgacgattatcgactgggcactggaaatggtcgataaa
gtgcgaggggtaaacggtcaagcgccacttaacattgacgctatcccgctggacgacaac
aaaacctttgagatgcttaaacgcgcggaaaccaccgccgttttccagttggaatctcgt
ggtatgaaggagctgattaagcgcctgctgccagactccctcgacgatatgatcgccctg
gtggcgctattccgcccaggcccgctacagtccggcatggttgatgactttatcaatcgt
aagcatggccgctccgaagtttcttacccacacccagattatcagcatgacctgttaaaa
ccggtactcagcccgacatacggcattattttgtaccaagagcaggtcatgcagattgct
caggtaatggctggctattcactggggcaggcagacatgctgcgccgcgccatgggtaag
aaaaagcccgaagagatggccaagcagcgttcaggctttatggaaggctgtgccgccaac
ggtattgataaagatctggctggcaatatctttgatcttgttgagaaattcgccggttat
ggttttaacaaatcgcactctgccgcctacgccttggtgtcttatcaaaccgcctggttg
aaagcgcactatcctggcccgtttatggccgccgttatgtcaacggaaatggataaccta
gacaaagtggtgccgctaattgaggagtgccgccacctcaagcttaccgtcacaccgccg
gatgttaatgttggtggctacaagttcaccgttgatacggaagggcgcgtcgtttatggc
ctgggtgccattcgcggtgtcggtgaaggcccgattggtgcgattgttgaggctcgtcgc
accgatggcccatttaaagaccttttcgatttttgtcgccgcattgatccaaagcggatg
aacaagcgcacgctggaagcgctgatacgctctggcgcactggataatcttggccctaat
cgggcggtgctcgccgccgcgatggaagacgccttgaaagctgctgctcaaaaccatgcc
aaccaaaatctgggtatgctagatatgtttggcgatgcgtttactgcggaagaggatgaa
acggatccttatgctgagtatcgaagcgcccgtgaatggacagatcgtgagcggctttca
ggtgaaaaagatacgctgggcctctatctgaccggccatcccattgatgaatatgagcga
gagctaaagcgctttgtctctactcgcattagtgatttgaaggcctctcgtgagccgcag
cgggtggctggcttagtggtagccatgcgcaccatgaagtccaagcgtggcgataccatg
gcgtttatcacgctggatgatcgcaccgggcgtatcgaagcctctctgtttggcgaacta
tttgagcaactgcggggccaaatcgaatctgaccaagtgattatcgttgaaggtgaggta
tccaacgatgacttctccggcggtttgcgcttgcggggcaaagacgttacgccgatggtg
accgcacggattcgctatggcgaagcagtagagcttgcattagatgctgaacagatcaac
ggccgtttggtcgatagcctacgcgagagtttgacgccataccgcgataccgacggattg
ccggtgcggctgcagtatcgccactcagcagcggttggctggctggcactggccgaagag
tggaaagtagctcccagcgatgacttattgttggccctacgtgatgtgcaggggcaggtt
ggcgttcagctacgctatcgttaa
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