Vreelandella venusta MA-ZP17-13: EI420_02625
Help
Entry
EI420_02625 CDS
T05892
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hvn
Vreelandella venusta MA-ZP17-13
Pathway
hvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI420_02625 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvn03021
]
EI420_02625 (rho)
03019 Messenger RNA biogenesis [BR:
hvn03019
]
EI420_02625 (rho)
Transcription machinery [BR:
hvn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EI420_02625 (rho)
Messenger RNA biogenesis [BR:
hvn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EI420_02625 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_25
NACHT
AAA_22
AAA
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
AZM94642
UniProt:
A0AAP9ZDU8
LinkDB
All DBs
Position
554515..555774
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKTVPELLDIAREMGIDNLARSRKQDIIFAILKKHAKSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRKGDSISGKIRPPKEGERYFALLKVSQIN
FDRPENAKHKILFENLTPLFPDDRLRMEIGNGSTEDLTARIIDLTAPIGKGQRGLLVSPP
KAGKTLMLQNIATSITRNNPECHLIVLLIDERPEEVTEMSRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMEAHLDRKLAEKRVFPAINI
RRSGTRREDLLASEDEMQRMWILRKLLNPMEDTAATEFLIDRLKDTKTNLEFFEAMKRR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcactgaactcaagcaaaaaaccgttcccgagctgctcgatatcgcccgcgag
atgggtatcgacaacttagcccgttcgcgcaagcaggacatcattttcgccatcctcaaa
aagcatgctaaaagtggagaggatatttatggtgatggtgtgctggaaatccttcaggat
ggcttcggcttcctgcgtagcgctgatagctcgtacctcgctggaccggacgatatctat
gtatcgccgtctcagatccggcgtttcaatctgcgcaaaggcgactccatttccggcaaa
attcgcccgcctaaagagggtgagcgctacttcgccctgctcaaagttagccagatcaac
tttgatcgtccggaaaatgccaagcataagattctctttgagaacttaacgccgctgttc
ccggatgatcggctgcgcatggagatcggtaacggttctaccgaagatcttaccgcgcgt
atcattgatctgactgcgccgattggtaaaggccagcgtggtctgttggtgtcaccgccc
aaagccggtaagacactgatgcttcagaatattgcgacatccattacgcgcaataaccct
gagtgccatctaattgtcttgctgatcgatgagcgtcctgaagaagtgaccgaaatgtca
cgcactgtgcgtggtgaagtggttgcctctaccttcgatgaacctcccgcccgccacgtg
caggttgcagaaatggttatcgaaaaagctaagcgcttagtagagcataagaaggacgta
gtgattctactcgactctatcactcgcctggcgcgtgcctataacaccgtggtgcccagc
tctggcaaagtgctaaccggtggtgtggacgcccacgctcttgagaagccaaaacgtttc
ttcggtgccgcgcgtaatatcgaagagggcggtagcctgacgattattgccactgcactg
gttgataccggttctaaaatggacgaagtcatctttgaagagttcaagggcaccggcaac
atggaagcgcaccttgaccgcaagctggctgagaagcgcgtgttccccgcgatcaacatc
cgtcgcagcggtactcggcgcgaagatctactagcgtctgaagatgaaatgcagcgcatg
tggatccttcgcaagctgctcaacccgatggaagacacggctgctacagagttcctgatt
gatcgtctgaaagataccaagacgaatctggagttctttgaagcgatgaagcgccgctag
DBGET
integrated database retrieval system
