Vreelandella venusta MA-ZP17-13: EI420_09160
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Entry
EI420_09160 CDS
T05892
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hvn
Vreelandella venusta MA-ZP17-13
Pathway
hvn03030
DNA replication
hvn03430
Mismatch repair
hvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EI420_09160
03430 Mismatch repair
EI420_09160
03440 Homologous recombination
EI420_09160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvn03032
]
EI420_09160
03400 DNA repair and recombination proteins [BR:
hvn03400
]
EI420_09160
Enzymes [BR:
hvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EI420_09160
DNA replication proteins [BR:
hvn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EI420_09160
DNA repair and recombination proteins [BR:
hvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EI420_09160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AZM95842
UniProt:
A0ABX2BDA8
LinkDB
All DBs
Position
complement(1939288..1940673)
Genome browser
AA seq
461 aa
AA seq
DB search
MSNTPLIFIDVETTGTRATRDRITEIAALKVVNDHITDRWVSLINPGTSVPSHISQLTGI
YDDMLIDAPSFQAIARSLRDWLGEDCLVAHNARFDASFLRNEFKRADITYQPHLLCTLRI
SRRLMPELPKHNLRALLAHFNIPQVRQHRAEDDATALWQLWETWQQQYDADSWQAALADE
QRHRSLPAHLPSEQLTGLPASPGVYLFYGHNRLPLYVGKSINLRSRVLGHFQRDHQDDKE
MRLAQQIQHIEWEETAGDLSAQLREAQLVKELMPIMNRQLRRQGHLKTWYWPTNQPCPTL
VSGKVISQPQPGKLFGLFRSAKEAKDALRNIAETHQLCPQVLGIDKGTGRCFANQLGKCR
GACCGQEPLESHTQRAQEALASFQVKTWPWPGRIIIREKSRKNGPTSHHVVDHWCYLGST
ATKQRALKLKGVAAKFDVDTYRILNRFLREPERHNLTVLPL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacacgccactgatatttattgatgttgagacaacaggcacccgcgcaacgcgt
gaccgcattaccgaaattgcggcattaaaggtagtcaatgatcacataacggatcgctgg
gtcagcctgattaatcccggcaccagcgtgccttctcacatcagccagctcaccggcatt
tatgatgatatgctgattgatgcgccctcttttcaggccattgcgcgcagcttgcgcgac
tggctcggtgaagactgtcttgtcgctcacaatgcacgctttgatgccagctttctgcgc
aacgagttcaagcgtgccgacattacctatcagccgcaccttctctgcacactgcgcatt
tcccgccgcttaatgcctgaactgcccaagcacaatctccgcgccttattggcgcatttc
aacattccacaagtccgccagcatcgggcagaggatgatgccactgcgctttggcaattg
tgggaaacctggcagcagcagtatgacgctgacagctggcaagccgctcttgccgatgag
cagcgccaccgtagtctgcccgcacatttgcccagtgagcaactaaccgggcttcctgct
tcgccaggggtttatttgttttatggccacaaccgccttccactgtacgttggcaaaagt
attaatttacgcagccgcgtgctgggccatttccaacgcgaccaccaggacgataaagag
atgcgccttgcccagcaaatacagcacattgagtgggaagaaaccgctggcgatttaagc
gcccagttaagagaggctcaactggtcaaagagctaatgccgattatgaatcgacagtta
cgtcgtcaggggcatttaaaaacgtggtattggccaaccaatcaaccttgcccaacactg
gtcagcggcaaagtcatcagccagcctcagccgggaaagctatttgggctgtttcgcagt
gccaaagaagcgaaagatgcgctgcgcaatattgccgaaacacatcagctttgcccgcaa
gtgctcggaatagataaaggaacaggacggtgttttgctaatcagttaggcaagtgtcga
ggcgcctgctgtggacaggagcctcttgaaagccacacgcagcgcgcccaagaggcacta
gcatcttttcaagtaaaaacatggccttggcccgggcgaattattattcgcgagaaaagc
cgtaaaaatggcccaactagccatcatgtggtcgatcactggtgctatttaggcagcact
gcgactaagcagcgtgccttgaagctgaagggagtcgctgccaaatttgatgtggatacc
tatcgcatcctaaaccgctttttacgtgagcccgagcggcataatctcacggtgttgccg
ctctag
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