Vreelandella venusta: EI420_12980
Help
Entry
EI420_12980 CDS
T05892
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
hvn
Vreelandella venusta
Pathway
hvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EI420_12980 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvn03400
]
EI420_12980 (recB)
Enzymes [BR:
hvn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EI420_12980 (recB)
DNA repair and recombination proteins [BR:
hvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EI420_12980 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
DUF294
Motif
Other DBs
NCBI-ProteinID:
AZM96540
UniProt:
A0A3S8YU36
LinkDB
All DBs
Position
2730371..2734129
Genome browser
AA seq
1252 aa
AA seq
DB search
MTTLPSTESSSTPLALGLPLRGSQLIEASAGTGKTFTIALLYVRLVLGHGQPDDDSHSFT
NGFTMPLVPPDILVVTFTEAASQELKDRIRARLVQAAEAFRATEGDDGLHQSDPLLAQLR
DDYPRAHWPLCARRLEVAAEWMDDAAISTIHSWAQRMLKEHAFDSGKLFHQEIVKDLTSL
TQEAVFDYWRTRIYPMDAPMAGVMMELFASPIALHGALRTLLQRHDVQLCFAGAPLPKKD
LQAQLRGLLPAREALNEAEDKARQAYCQDAEAIHQALHGLRSKLNGNKFRGKNDDTTFAS
WLAELNDWGRGKRCLAACKFVPKLATSQLLVNKGTTLPTFEVHDALEAWHELSTSIHTQA
KELKPLVLADAREWVSNRVNQQLSQRAEMGFDGMIQGLADALSGKGGDALAHRLRTQFPV
AMIDEFQDTDPAQYRIFDAIYQVQESDLSSALILIGDPKQAIYGFRGGDIYTYLKARAAT
SPRHHTLATNFRSSENVVASVNQLFRHAENAFTRKAFRFANETTQENPMPFTPAGANGRK
EALVLNSKPTAALTAWWVGEDDEPVNKKRYLAQAARHCANQIASWLNGAASNASGFENTT
GQAFRPLQASDIAILVRDRTEAAAIRSALSERQLASVYLSDRDSVFATPEAKDCWRWLKA
IAHPEEVSTLRAALATPTLGMSLAQLDELHHNELAWEATQERFAEYRARWHRQGVLPALR
QLMHDYRVPEQLLAKPQGERCLTNLLHLAEWAQQASDTLDGDHALIRVLGEHIQDPKRDE
QILRLESDADLIQVVTIFKSKGLEYPIVALPFIATFKEINGKWGTPLFHDEGGNAFLELA
NSKDEAKEGFEAANDERLSEDMRLLYVALTRARHATFIGLAALKHGNSKKAQIDKSGIGY
LLGGGKVLPDLGSIKSEWQVHSEACADITSHPATDEEISYQVQATNPELKTARTPSHQAF
NPWWIASYSALQQKGVNAPETPQAEIETEEHQPIRTALIHGTPEVGSLHAFPKGPNPGTF
LHGVLETLANEGFDNASRDPELTQRMLQRCAQRGWEAHAPALKAGITAWLHTPLAAEGEE
GPVLASLTHYRAEPDFWFATVNAKTPVLDKLVKETLFPGEPRPALGFQQLNGLMKGFIDL
LAEHNGQYYVIDWKSNWLGPSDAAYTQDALARAALDKRYDMQLCIYLLALHRHLSQTLPA
YDYDHHIGGAMLVFLRGIQAPSRGVLRVKPPLAFIERLDDLMAGENHKEVAV
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgctcccttccactgagtcgtcttctaccccattagccctgggccttcccctg
cgtggtagccaactcattgaagccagtgccggtacgggtaagacctttacgattgcgctc
ttgtacgtgcgcttggtactcggccacggacagcccgatgatgacagccattccttcact
aatggcttcacgatgccgctggtgccgccggatattttggtcgtcacctttacagaagcc
gctagccaagagctgaaagaccgcatccgtgcccgcttggtgcaagccgcagaggcgttt
agggcaacagagggtgacgatggcttgcatcaaagcgaccccctgctggcgcagctgcgc
gacgattatcctcgcgcccattggccgctctgcgcccgcaggttagaagtggccgccgag
tggatggatgacgccgctatttctaccatccacagctgggcgcagcggatgctcaaggag
catgccttcgatagcgggaaactgtttcatcaagagatagtgaaagacctcacctcctta
acgcaggaggccgtatttgattattggcggacacgcatttaccccatggacgctcctatg
gcaggagtgatgatggagttattcgcatcgccaatagcgctacatggcgctttacgcact
ttattacagcgtcatgatgttcaactctgctttgcaggcgcgccgttacccaaaaaagac
ctgcaggcacagctacgggggctgcttcccgctcgtgaagcgctaaatgaggctgaagac
aaggcacggcaggcttattgccaggatgcagaagcgatacaccaagcgctgcatggcctt
cgcagcaagctcaatggcaataagtttcggggcaaaaacgatgacacaacgtttgccagc
tggttagcagagctcaacgactgggggcggggaaagcgttgcctggctgcgtgtaagttt
gttcctaaactcgccaccagccagctgttagtgaataaaggcaccacgctacccaccttt
gaggttcatgatgcgttagaggcatggcatgagctgtccaccagtattcacactcaagcc
aaagaactgaagccgctggtactggccgacgcacgcgagtgggtctccaaccgagtaaac
caacagctctcacaacgtgctgagatggggtttgacggtatgatccagggccttgctgat
gctcttagcggcaaaggcggcgatgcactcgcacacaggctacgcacgcaatttcccgtg
gcgatgatcgatgagttccaagataccgaccctgcgcaataccgtatttttgatgcgatc
tatcaggtgcaagagagcgacctctcgtcggcactgatcctgattggcgatcccaaacaa
gccatttacggctttcgcggtggcgatatctatacgtacttaaaggcgcgtgctgccaca
tctccacgtcatcacaccctggcaacgaacttccgttcaagcgagaacgtagtggcctcg
gtaaatcaacttttccggcatgccgaaaatgcgtttactcgaaaagccttcaggtttgcc
aacgaaacaacccaagaaaaccccatgccgtttacaccggcaggcgcgaatggccgaaaa
gaagcgctagtgctgaatagcaagccgacagcggcgctaacagcgtggtgggtgggtgaa
gatgacgaaccggtgaataagaagcgctaccttgcgcaggccgcacgccactgcgcgaat
caaatcgccagctggcttaacggcgctgcctcaaacgcctcaggctttgaaaacactacc
ggccaagcgtttcgaccacttcaggcgagcgacattgctattttggtgcgcgaccgcaca
gaggcagctgctatccgttcggcattgagcgaacgtcagttagccagcgtgtatctatct
gaccgcgacagcgtatttgctaccccagaagcgaaagattgctggcgctggcttaaggct
attgctcatcctgaagaggtctcgacactacgcgcagcacttgccacgcccacgctgggg
atgagccttgctcaactggatgaacttcaccataacgagctcgcttgggaggcaacgcaa
gaacgttttgctgagtatcgcgcacgctggcatcgccagggcgtactgcctgctttacgt
cagctgatgcacgattatcgtgtgccagagcagctgctcgctaaaccccaaggggagcgc
tgcttaactaacctgttgcaccttgcggaatgggcccaacaggcgagcgataccttagac
ggtgaccatgcgctgattcgcgttctcggtgaacatattcaagacccaaaacgcgatgag
caaatcctgcgcctagaaagcgatgccgacctgatccaggtggtgaccatcttcaaatcg
aaaggactggagtacccgattgtcgccctgccctttatcgcgacgtttaaagaaattaac
gggaaatggggcacacctctgttccacgatgaaggcggcaacgcgtttttagagctagcc
aatagtaaagatgaggcgaaagagggctttgaagcggctaatgatgagcggctttctgaa
gatatgcgcctgctgtatgtcgcgctaacccgcgctcgccacgccacttttatcgggtta
gccgccttgaaacatggcaacagcaaaaaagcccagatagataaatccggtattggctac
ttattgggtggcgggaaggtattgcccgaccttgggtcgattaaaagcgagtggcaggtg
cactcagaggcttgcgccgatattacctcccatcctgccacggatgaggagattagctat
caagtacaagcaaccaaccctgaattaaagaccgcacgaacaccgagccaccaagcgttc
aacccgtggtggattgccagctactcggctctgcagcaaaaaggtgtgaatgcccctgaa
acgcctcaggcagaaattgaaacggaagagcaccagccgatacgcaccgcccttatccat
ggcacgcctgaagtgggctcgctgcatgcgtttcctaaaggccctaaccccggcaccttt
ttgcacggcgtattagaaacgctggcgaacgaaggttttgataacgctagccgtgaccca
gagcttactcagcgtatgctgcagcgctgcgctcaacgaggttgggaagcacatgcacct
gccttaaaagccggtatcacggcgtggttacataccccactagcagcagaaggcgaggaa
ggcccggtgttggcatcgctcacccattaccgcgctgaacctgatttttggtttgccaca
gtaaatgccaagactccggtactcgataagctggtgaaggagacgctatttccaggtgag
ccacgtccagcactgggttttcaacagctcaacggtttgatgaaaggctttatcgaccta
ctggcagagcacaacggccaatattacgtgattgattggaagtcaaactggctggggcct
tctgatgcggcttacacccaagacgcgcttgcgcgagcagcactggataagcgctacgac
atgcagctgtgtatttacttgctggcactgcatcgccatctaagccaaaccctgcccgcc
tacgactatgaccaccatattggcggtgccatgctggtctttctgcggggcatacaagcg
cctagccggggcgttctgcgtgttaagccaccccttgcgtttattgagcgcctggatgac
ctgatggccggagaaaatcacaaggaggtggcggtatga
DBGET
integrated database retrieval system
