Vreelandella venusta MA-ZP17-13: EI420_14420
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Entry
EI420_14420 CDS
T05892
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hvn
Vreelandella venusta MA-ZP17-13
Pathway
hvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EI420_14420 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvn03400
]
EI420_14420 (recC)
Enzymes [BR:
hvn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EI420_14420 (recC)
DNA repair and recombination proteins [BR:
hvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EI420_14420 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AZM96797
UniProt:
A0ABX2B6Y7
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All DBs
Position
3101565..3105206
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AA seq
1213 aa
AA seq
DB search
MSANSHCSPTPFSPTSLTPGFMVVHANRLEDLRGLAVQWMRLHPLGPLENETILVQSNGI
GQWLKLALAEDPENGGAGIAAALDVMLPARFLWQAYRTVLTHVDQDGDAVPETSPFDKSR
LVWRLLRLLPTLAGQEVFAPLAQFLEVDRDQRKHYQLAERLADLFDQYQVYRADWLDAWA
NGDDVLITARGEPRPLEEHQRWQPALWRILREDVAASQGDAGINSSRAQVHRRFLKATEQ
LEGQPCPRGLPRRLIIFGISSLPQQTLEALAALSRCCQIVLCVHNPCQFYWADIIEHKDL
LRANRYRQRRKTGMPEALDVLGTGDADDALHLHAQPLLAAWGKQGRDYLRLLDEHDDSGN
YQTLFEQQALRIDMFEPFNGVDRDCLLSQLQDDIRELRPVAETQTHWPALGSADDSMVFH
IAHGPQREVEILHDQLLAAFSADPDLRPRDIIVMVPDIDRYAPHIAAVFGQLPSDDPRHI
PYTLSDQASRHRLPLMIALEKLLRLPELRLSVSDLLDLLDVPALRQRFGLEERDLPVLER
WMEGAGIRWGLNAKQRQTLELPGGLSQNTWAFGLRRLLLGYTVGEGHAWQGIEPFDDIGG
LEAGLAGPLATLLEKLEETWETFCQPTDAANWVARLRTLLETFFLTDDAQESVMLTKLEN
GLQQMLESSEEAQLTEPLPLSMVREHWLAQIDEHSLSQRFLAGAVNFATLMPMRAIPFKR
VCLLGMNDGEYPRSQPPLDFDLMGSDYRPGDRSRREDDRYLFLEALLSARDQLYISWVGR
SQIDNTPLPPSVLVGQLRDHLEAGWQIENGTPLLEALTTEHPLQPFSRAYFASNPQVSRL
FTHAHEWREVHAPRTPQAAHPTLSPPENIPTNLTLGQLGQFLREPVRAFFNTRLGVYFEQ
EAIAELDEEPFALDGLQNWQLQDQLIAAQRHAIDRGEPRIEALHAALERFQGQGVLAMGA
FGERMRDALAEPMEALFSDYEEALDAWPIALDDPAAIHLAGSNGITLEDWLGELRQDDVG
NRCRLLLLSSSLIKNSKYQWHLLLRHWVAHLAGNLSGPMTTQLLSKAGNITLEPIAADTA
HAHLETQLSAWQHGLEVPLPLAPQAAFAWLTKLGTPDIAIEKGRESDAYAAAEKVYESGF
KTTGEADQSPYLGHQWPRFERLFFDRTANEKHTFAELTEALYAPLFYAVKGNAKKDNAKK
DDANKDNAKKAAS
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaattcacactgctcaccaacgccattctcgccaacgtcgcttacccctggc
tttatggtggtgcacgctaaccgcctggaagacttgcgcgggttggcggtgcagtggatg
cgcttgcacccgttgggaccgttggaaaacgagaccattctggtgcagagcaacggtatt
gggcagtggttaaagttagcgttggcggaagacccagagaatggcggcgcaggtatcgcc
gccgcgctggatgtcatgctgcccgcgcggtttctatggcaggcctaccgcacggtgctc
acccacgttgatcaagatggcgacgcggtgcctgaaacctcgccgtttgataaatcgcgc
ttggtatggcggctgctacgcctgctgcccacgctagcggggcaggaagtgttcgcgccg
ctggcgcagttcttggaagtcgaccgcgaccagcgcaagcactaccaactggccgagcgg
ctggcggatttgttcgaccagtatcaggtctaccgcgccgactggctggatgcctgggcc
aacggtgatgacgtgctgattactgctcggggcgaaccccgcccgctggaagagcaccag
cgctggcagcccgcgctatggcgcattctgcgcgaagacgtcgccgccagccaaggcgat
gcaggcatcaacagtagccgtgcccaggtgcatcggcgctttttgaaagcgactgaacaa
ttggaaggccagccctgcccgcgcggtttgcctcggcggctgattatttttggtatttca
tcgctgccccaacaaaccctggaagccctggcggcactctctcgctgctgccaaatcgtg
ctgtgtgtgcacaacccctgccagttctactgggcagatatcatcgagcacaaagattta
ttgcgcgccaaccgctaccgccagcggcgcaaaaccggtatgcccgaagcgctagatgta
ttgggcactggcgacgccgacgatgccctgcatcttcacgctcagccgctactcgccgct
tggggcaagcagggccgcgactacttgcgcctgctggatgagcacgacgattcgggcaac
taccaaactctgtttgagcagcaggcgctgcggatcgatatgtttgagccgtttaacggt
gttgatcgcgactgcctgctcagccaactgcaagatgatattcgcgaactgcgccccgtg
gcggaaacccaaactcactggcccgcgctaggctcggccgatgattccatggtgtttcat
attgcccatggcccccagcgggaagttgagattctccacgaccagttgctggccgccttt
agcgccgaccccgacctgcgcccgcgggatattatcgtcatggtgccagatatcgaccgc
tacgcgccgcatatcgccgcagtgtttggccagctaccaagcgacgacccacgacatatt
ccctatacgctttccgaccaagccagccgccaccgcctaccgctgatgattgccctggaa
aagctgctgcgcctacctgagctgcgcctttcggtcagcgacttactggatctgctcgat
gtacccgccctgcgccagcgctttggactggaagagcgcgacctaccggtactcgagcgc
tggatggagggtgcaggcattcgttgggggctgaatgccaagcagcgccagacgcttgag
ctacccggcgggttaagccaaaacacctgggcgtttggcctgcgccgcttgctgctcggc
tacaccgtgggcgaaggccacgcttggcaaggaatcgagccgtttgacgatatcggcggg
ctggaagcgggccttgccgggccgttagccaccttgttggaaaagctcgaagagacctgg
gaaaccttctgccagcccaccgatgcggccaactgggtagcacgcctacgcacgctgctg
gaaaccttctttctgaccgacgacgcccaagaaagcgtaatgctcaccaagctggaaaac
ggtttgcagcaaatgctggaaagcagcgaggaagcccagttaaccgaaccgctgcctctc
tccatggtgcgcgaacactggctggcacagattgatgaacacagcctttcccaacgcttt
ctagccggtgcggtcaacttcgccacgctaatgcccatgcgcgccattccgtttaagcgc
gtgtgtctgctgggcatgaacgacggtgagtacccccgctctcaaccaccgctagatttt
gatttgatgggcagtgactaccgccccggtgaccgctcccgcagggaagacgaccgctac
ctgtttttggaagcgctgctctccgcccgcgaccagctctacataagctgggtcggcaga
agccaaatcgataacacaccgctaccgccttcggtactggtcggccaactgcgtgaccac
ctggaagcaggctggcagatcgagaacggcacgccgctgctggaagcgctaactaccgag
cacccgctgcagccgtttagccgcgcttattttgctagcaacccgcaagtctcgcgactg
tttacccatgcacatgaatggcgcgaggtacacgcaccgcgcacgcctcaagctgcccat
ccgacactttccccaccggaaaacatccccaccaacctgacgcttggccagttgggccaa
ttcctgcgcgagccggtacgcgcctttttcaatacccggctgggggtgtatttcgagcaa
gaagcaattgccgaactggacgaagagccgttcgccctggatggcctgcaaaactggcag
ttgcaagaccaactgatcgccgcccagcgccacgccattgaccgcggcgagccacgcatt
gaagcactgcacgcagcccttgagcgttttcagggccaaggcgtattggccatgggtgcc
tttggcgagcgtatgcgcgatgccttagcagaacccatggaagccctgttcagcgactac
gaagaagccctggacgcttggccgattgcgctagatgacccagcagccattcacctagca
gggagtaacggaattacgttggaagactggctgggcgagctacgccaggatgacgtgggc
aaccgctgccgcctgctattactcagcagtagcctgatcaagaacagcaagtaccagtgg
catctgctgctacgccactgggttgcccatctggctggcaatctcagcggtccgatgacc
acccagttactttccaaggccggcaatatcactctggagcctatcgctgccgacaccgcc
cacgcccacctggaaactcagctaagcgcctggcaacacggcctggaagtaccgcttccg
ctagccccccaggccgcctttgcttggctgacaaaactgggtacacctgacattgcgatt
gagaaaggcagggaaagcgacgcctacgccgcagccgaaaaagtctatgagagcggattt
aaaaccaccggcgaagccgaccagagcccttatctcggccaccaatggccccgcttcgag
cggctgtttttcgaccgcaccgccaacgaaaagcacacctttgccgaactcacagaagcg
ctgtacgccccgctgttttacgctgtgaaaggtaatgcgaagaaagataacgcgaagaaa
gatgatgcgaacaaagataacgccaagaaagcggcatcgtag
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