Vreelandella venusta: EI420_14445
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Entry
EI420_14445 CDS
T05892
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hvn
Vreelandella venusta
Pathway
hvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EI420_14445 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvn03400
]
EI420_14445 (recD)
Enzymes [BR:
hvn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EI420_14445 (recD)
DNA repair and recombination proteins [BR:
hvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EI420_14445 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
AAA_11
UvrD_C_2
Viral_helicase1
SH3_13
AAA_22
Helicase_RecD
UvrD-helicase
nSTAND3
TetR_C_41
AAA_28
NTPase_1
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AZM96802
LinkDB
All DBs
Position
3111536..3113869
Genome browser
AA seq
777 aa
AA seq
DB search
MSKPKDTHTFDLFGDAVETQDAQPTTASTPMSAHPALSDTAELLTLCERWVARGWLRDLD
RALVRFLATEAADAPALLLLAAALASHQLGRGHVCLDLTATLNAPDFALSLPPEGDDLSD
PPPLPSDVLATLTLSEWQAALHHPLLTSEGPGNTPLVVVTTHSGAGDKSHTRLYLRRYWQ
YEQTLHQQIATRLTATGDDSPFDLLPQALNVLFKPSDGLDWQKTACALAARSRFGIITGG
PGTGKTTTVVRLLALLQTLQLANAPSQPLRIRLAAPTGKAAARLNESIAGQVSQLPFKGL
ATLLEGSLWEGASALVRHVDDDKATEQLKAAIPTEVTTLHRLLGARPDTRHFRHSAANPL
ALDVLVIDEASMVDIEMMAAVLSALPANAQCVLLGDKDQLASVEAGSVLGDLCRRAEAAH
YTPETAQWLEHATGQPLPPEYLDTDGQPLDQAITMLRVSHRFNEHSGIGQLAQAINQPSH
AQTAREKQQAVNAVLRHGYPDLHHLTLAEDTALDKLVIHGSADKFLNGGEGRTNHKSEPI
APPTGYRHYLKVLNAQRPRGESFEDNPAAYNAWASEVLSAYSHFQLLCALRKGPWGVEGL
NLHIAKILRSEKLLFGSDYTLEKGWYEGRPVLVTQNDYGLKLMNGDIGITLAVPDPRNPQ
QKLLRVSFPSSSATSDADNPIRWVLPSRLHAVETVFAMTVHKSQGSEFLHTALLLPPTIN
PILTRELVYTGITRARDWLTVVEAKRGVLNEAVTREVMRVSGMGVNAPISNFSSKRA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcccaaagacacccacaccttcgacctgtttggcgatgccgttgaaacacag
gatgcccagcccaccacagcttccacgccaatgagcgctcaccctgcgttaagcgatacc
gctgaattactaaccctatgcgaacgctgggtagcaagaggctggctgcgcgatttagac
cgcgccctggtgcgctttctagcaacagaagcagcggatgcccccgcactgctgctgtta
gccgctgccctggccagccatcaactaggccgaggccatgtgtgtctggatttaaccgcc
acgcttaacgcaccggatttcgccctttcgcttccgcccgaaggggatgatttaagcgac
ccgccgccgctgcccagcgatgtgctggcaacgctcacgctaagcgagtggcaagctgcg
ctgcatcacccactgctcaccagcgaaggccccggcaatacaccgctggtggtagtaacg
actcactcaggcgccggtgataagagccacacgcggctctacctacgccgctactggcaa
tacgagcaaaccctgcatcagcaaatcgccacacggttaacggcgacgggtgacgacagc
cccttcgatcttctcccccaggcgctgaacgttttgttcaagcccagcgacggcctcgac
tggcagaaaaccgcctgtgcgctagccgcccgcagccgcttcggcattattaccggcggc
cctggcaccggcaaaaccaccaccgtggtgcgcctgctcgctctgctgcaaacgctgcaa
ctggccaacgcccccagccagccgctgcgcattcgcctagccgcccccaccggcaaagcc
gccgcccgcctaaatgaatccatcgctgggcaagtcagccaactccccttcaaaggatta
gctaccttgctggaaggatctttgtgggagggagcttcagctttggttcgacacgtcgac
gatgataaagccacagaacagctaaaagccgccatcccaactgaagtcaccacacttcac
cgcttattaggcgcaagacccgacacccgccacttccgccacagcgccgccaacccgcta
gcgctggacgtactggtcatcgacgaagcttcgatggtagatatcgaaatgatggccgcc
gtgctgagtgccctgcccgccaatgcccagtgcgtgctgctgggggataaagaccagcta
gcctcggtagaggctggctcggtacttggcgatttatgccgccgtgccgaagccgcccac
tacaccccagaaaccgcccaatggctggaacacgcaaccggccagccgctgccgccagag
tacctggatactgacggccagccgctcgaccaagccattaccatgctgcgggtaagccac
cgctttaacgaacacagtggcatcggccagttagcccaggcgattaaccagcccagccat
gcccaaactgcccgggaaaaacagcaggctgttaacgccgtgctgcgccacggctaccca
gacttacaccacctaacgcttgcagaggacaccgcgctggataagttggtcattcacggc
agcgcggacaagtttctcaatggcggtgaaggccgcactaaccacaaaagtgaacccatc
gccccgcccactggctatcgccactacctaaaggttctgaacgcacagcgcccgcgtggg
gaatcgtttgaggacaacccagcggcctataacgcctgggccagcgaggtactcagtgcc
tacagccacttccaactgctatgcgcgctgcgcaaaggcccctggggagtagaaggctta
aacctgcatatcgccaaaatcctgcgcagcgaaaagctgctgtttggcagtgattacacg
ctagaaaaaggctggtatgaaggtcgcccggtgctggtcacccaaaacgactacggtcta
aaactaatgaacggcgatatcggcatcaccctggcagtgccggatccccgcaatccgcaa
caaaagctgttaagagtgtcctttccttcatcaagcgccacgagcgatgccgataacccc
atccgctgggtactgccctcccgcctgcacgcggtagaaaccgtattcgcgatgacggta
cacaaatcccaaggctcggagttcctgcacaccgccctgctgctaccgcccaccatcaac
ccgattctcacccgcgagctggtctacaccggcatcacccgcgcccgcgactggctcacg
gtggtggaagccaaacgtggagtgttgaatgaggcggttactagggaagtgatgagggta
agtgggatgggggttaacgccccaataagcaattttagtagtaaaagagcatag
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