Vreelandella venusta: EI420_15105
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Entry
EI420_15105 CDS
T05892
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hvn
Vreelandella venusta
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvn03400
]
EI420_15105
DNA repair and recombination proteins [BR:
hvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EI420_15105
Archaeal homologous recombinant proteins
EI420_15105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Focal_AT
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AZM96922
UniProt:
A0A3S8YV66
LinkDB
All DBs
Position
complement(3241583..3244648)
Genome browser
AA seq
1021 aa
AA seq
DB search
MTPLTLTMQAFGPFAGSETIDFTALGKSPLFLINGPTGAGKSSILDAICFALYGQTTGND
RDAGQMRCDQATATLLTEVSLDFRLRDGTYRVRRVPQQERPKATGEGTTTQSAEAQLWRL
TSEGDEDECLVARKVTDANSQLHALIGLDANQFRQVMVLPQGKFRELLLAESKDREKIFS
QLFQTQIFQRIEERLRTQANQIERAVNDHRQHISGILAGGELESEAALAQEVEALTPQVG
QARQRFEIAQQQRRSAEQRRDAAQALQRQFEARDSLAAEKARHLEQQAQITAFQSRLTQS
DHAQALRPYRAALVQAQQELTTAQEEQRQADAALTTQRTNTEQAKGTFEATRQRQTELPA
LRERYHQLGEFIHKSQQLSELEASWQAAQTAWQQADGILKRDEAQLDGIRQQGEALSVTL
EQLQTESQQLASAPAELSRHESLLAQRQELEALMRQGRELVAQQQQAAAALQGRRSEAEQ
AKRHATEQEMRWHQGQAALLALTLEAEAPCPVCGSLEHPSPAVQHADIVTQAQVEEARSA
QEQARQALQTAERQEQQLAQQLSYNAEQAQRLSHQLGEWASQPPFELQQACEQLRRQVAR
RQQVESEINRQSAARDELRSGWGTLDKQLKAQRPVVEKAKEEALRLASQRDQLSQSLPED
ARNPLAMRQALTELDNQIAELEQAWERAQQVLSTSQTQQARAEEQLRSANQQLARKQQAL
EQAQAGWQSALQASSFDCEAAFQAAQLEDSQRQDLARQVEAYQRRLAELDGALHNYHAQL
AEKTPPDLAALTALTEAAQAEEHSQLDEWRALDGRLNTLQGIRQKLTAAREAQAELEAQY
RVWGTLSEVANGRTGNRISLQRFVLGVLLDDVLIQASERLVRMSRGRYQLVRREDPSKGN
KASGLELDVADTYTGKSRSVATLSGGESFMAALALALGLSDVVQAYAGGIQLDTLFIDEG
FGSLDQDALDQAIAMLSELQMGGRMIGIISHVSELKEQMPVRVEVRASRFGSSVEVKGAL
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgttaacgctcaccatgcaggcgtttggcccctttgcaggcagcgaaacgatt
gactttactgcgctgggtaaaagcccattgtttctgattaatggccccacgggcgcaggg
aagagctcgatattagatgccatctgttttgcgctttacggccagaccaccggtaatgac
cgcgatgccggacaaatgcgctgtgaccaagctactgctaccttgttgactgaggtgagc
ttggattttcgactgcgcgatgggacttaccgagtgcgccgggtgccccagcaggagcgc
cctaaggccactggcgaaggcactaccacacaaagtgcagaagcccagctgtggcggctt
acctcggaaggcgatgaggatgaatgtttggtggcgcgtaaggtcaccgatgccaacagc
cagctgcacgccttaataggtctggatgctaatcaattccgccaagtcatggtgctcccc
caggggaagtttcgtgaactgttgttagcggaatcgaaagatcgcgagaaaattttttcg
cagctatttcaaacccagatttttcagcgtattgaagagcgcctgcgtacccaggcgaat
caaatagagcgagcggtgaatgatcatcgccagcatatcagcggcattttggccgggggc
gagctggaaagcgaagcggcattggcgcaagaagtagaggcgctaaccccgcaagtaggt
caagcgcgtcagcgttttgaaatcgctcagcaacagcgccgtagtgctgaacagcgacga
gatgccgcccaagcgttacagcgccaatttgaagcgcgggacagcctcgccgcagagaaa
gcacgccaccttgagcagcaggcgcaaataacggcctttcagagccgcttgacccaaagc
gaccacgctcaagcgctgcgaccctatagggctgcgttagtccaagcgcagcaggagctc
acgaccgctcaagaagagcagcggcaagccgatgccgcgctgactacccagcgtacgaat
actgaacaagccaaaggtacctttgaagcgacacgccagcgccagaccgaactacctgca
ctgcgcgagcgctatcatcagttgggcgagtttatccacaaaagccagcagttaagtgag
cttgaagcgagctggcaagcggcacaaaccgcttggcagcaagccgatggcatacttaag
cgtgatgaagctcagttagacggtattcgtcagcaaggtgaagcgctaagcgttacgctt
gagcaactgcaaacggaaagtcagcagttggccagcgcccctgcagagctgagccgtcat
gagagcctgctagctcagcgacaggagttggaggcgctgatgcggcaagggcgtgaactt
gtcgctcaacagcagcaggcagcggcggcacttcaaggtcggcgcagcgaagcagaacag
gctaagcgccacgcaaccgagcaagagatgcgctggcaccaagggcaagccgcactgtta
gcgcttaccctggaagcggaagcgccttgcccggtgtgtggcagccttgaacacccatcc
ccagcggttcagcatgctgatattgttacccaggcgcaggtagaagaagcccgctcagcc
caggaacaggctcgccaggccttacaaaccgctgagcgtcaggagcagcagttagcacaa
cagcttagctataacgctgagcaggcgcagcgccttagtcaccagctaggtgagtgggcc
agccaaccgccgtttgagctgcaacaggcctgcgaacaattgcgccgccaagtcgcgcgt
cggcaacaggtcgagagtgagattaaccggcaaagcgctgcccgtgacgagctacgtagc
ggctggggcacgctggacaaacagctcaaagcccagcgacctgtggttgaaaaggccaaa
gaggaggcgttacggctagcgagccagcgcgatcaattaagccaatcactgccagaagat
gcccgcaacccgttggccatgcgccaagcgctcactgaacttgataaccaaattgctgag
cttgaacaggcctgggagcgagcgcaacaggtgctttcgacgagccaaacccagcaggcg
cgggcagaagagcagctgcgcagtgcaaaccaacagctggcgcgaaaacagcaagcgctt
gagcaggcccaggctgggtggcaatcggcgctacaagccagttcatttgactgcgaagct
gcttttcaggcagctcagctagaggatagccagcggcaagatctggctcgccaagtagag
gcctatcaacgccgtttggctgaactggacggtgcgctacacaattaccacgcccagctg
gccgaaaaaacgccgccagatctcgccgcactcaccgcgcttaccgaagccgcccaagcg
gaggagcatagtcaactcgatgagtggcgggcgttagatgggcggctaaatacgctgcag
gggattcgtcaaaaacttaccgccgcccgtgaggctcaggccgaacttgaagcccagtat
cgggtatgggggacattaagcgaagtggcgaacgggcgcaccggtaatcgcattagcttg
cagcgatttgtactgggtgtgctgctggacgacgtactgattcaggcgtctgaacggctg
gtgcgtatgagccgcgggcgctaccaattagtgcgacgcgaagacccatccaagggtaat
aaagcctcgggattggagttggatgtggccgatacctacaccggtaagagccgttcggta
gcgacgctttccggcggcgagtcgtttatggcggctttggcgctggcgctagggctttct
gacgtggtacaggcctacgcaggcgggattcagttggatacgctatttattgatgagggc
tttggtagccttgatcaggatgcattagaccaagcgattgcgatgctcagtgagttacaa
atgggcgggcgaatgatcggcattatctctcatgtcagcgaactcaaagagcaaatgcct
gtccgtgttgaagtgcgtgctagccgatttggtagctcggtggaggtgaagggcgcgctt
ctttaa
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