Vreelandella venusta: EI420_16885
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Entry
EI420_16885 CDS
T05892
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hvn
Vreelandella venusta
Pathway
hvn03030
DNA replication
hvn03410
Base excision repair
hvn03420
Nucleotide excision repair
hvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EI420_16885 (polA)
03410 Base excision repair
EI420_16885 (polA)
03420 Nucleotide excision repair
EI420_16885 (polA)
03440 Homologous recombination
EI420_16885 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvn03032
]
EI420_16885 (polA)
03400 DNA repair and recombination proteins [BR:
hvn03400
]
EI420_16885 (polA)
Enzymes [BR:
hvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EI420_16885 (polA)
DNA replication proteins [BR:
hvn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EI420_16885 (polA)
DNA repair and recombination proteins [BR:
hvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EI420_16885 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EI420_16885 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AZM97232
LinkDB
All DBs
Position
complement(3643543..3646317)
Genome browser
AA seq
924 aa
AA seq
DB search
MARAPIVLVDGSSYLYRAFHALPPLTTSNGQPTGAVKGVLNMLKRLIKDYPESPMAVVFD
APGKTFRDEMYSDYKAHRPPMPDDLRSQIKPLHACVKALGLPLLCIEGVEADDVIGTLAH
RATQAGRDAVISTGDKDMAQLVNDHITLVNTMKEETLDETGVKEKFGLPPSLIIDFLALM
GDKVDNIPGVPGVGEKTAIGLLQGMEGGLETIYGDLERVKTLSFRGAKTLPKKLEEHREQ
AFLSYQLATIKTDCELPVGLDDLDIAHPDREALVELYKEMEFKQWLAELLAGSDEGVDDV
KGGEPAPDNAANEVADSAATSSQRHDHVIVEQAEFDAWLARLRKAKRFCFDLETTSLNYM
DADIVGVGLALEAGEAAYIPLAHDYLDAPAQLDRQQVLQALKPLLEDPEKTKIGQNLKYD
ISVLANYDIRVAGPLADTMLASYVLNSTATRHDMDSLALKYLGEKTISFEEIAGKGAKQL
TFNQIALEQAVPYACEDVDITLRLQEILRPQVEREGRLADVLDHLELPLINVLSRIERNG
VALDAERLHEQSQQLERRIRELESEAFELAGREFNLGSPKQLGQILFEEQKIPVIKKTPK
GAPSTAEAVLEELALDYPLPKVIMQHRGLAKLKSTYTDKLPRLLNKTTGRVHTSYHQAVT
ATGRLSSSDPNLQNIPIRTEEGRKIRQAFVARPGYRIVAADYSQIELRIMAHLSEDKGLL
EAFAEGRDIHTATAAEVFGTALEKVSADQRRSAKAINFGLIYGMSAWGLSRQLHIDRNQA
QTYIDRYFDRYPGVARYMDRIRTQAAEDGFVETVLGRRLYLPEIHSQNRNRRQGAERTAI
NAPMQGTAADIIKQAMIDVDAWLAEGEFDALMVMQVHDELVFEVAEGQVEAFIEQVQTRM
QAAATLSVPLIVEAESGSNWDEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgccccaatcgtgcttgtcgatggctcatcgtacctatatcgcgcttttcat
gcgttgccaccgttaacgacctccaacggccagcctacgggagccgtgaaaggcgtatta
aatatgctcaagcggctgattaaagactacccggaaagcccaatggcggtggtgtttgat
gcgccaggaaaaaccttccgcgatgagatgtacagcgactataaagctcatcggccacct
atgcccgacgacctgcgcagccaaattaagccgctgcacgcttgtgtaaaagcgctaggc
ttaccgctactgtgcattgaaggtgttgaagccgacgacgtgattggcactctggcccat
cgtgccacccaggcgggtcgtgatgcggtgatttcgactggcgataaagatatggcgcag
ctggtgaatgaccacattacattggtcaacaccatgaaagaagagactctcgacgaaacg
ggcgtcaaagagaaatttggtcttcccccctcactgatcattgattttttggcactgatg
ggggacaaggttgataacattcccggtgtgccgggggtgggcgaaaagacagccattggc
ctgctgcaaggcatggaaggtggtttagagacaatttacggagatcttgagcgcgtcaag
acactcagcttccgtggtgcgaaaacgttacccaagaagctggaagagcaccgtgaacag
gcctttctctcttatcagctagcaaccattaaaaccgactgcgagttgcccgtggggctg
gatgacttggatattgcgcatcccgaccgtgaggcgctggtagaactctataaagaaatg
gagttcaagcagtggttggctgagctactggcaggtagcgacgagggcgtcgatgatgta
aagggtggcgagcctgcgcctgataacgctgctaatgaggtggctgatagcgctgcgact
tccagccagcggcatgatcacgtcatcgttgagcaagctgagtttgatgcatggctagcg
cgactcagaaaagccaagcgcttttgcttcgacttagaaacgaccagcctgaattatatg
gacgccgatattgtcggcgttggcttggcactggaagctggtgaagccgcctatatccca
ctggcccatgactacctggatgcccccgctcagcttgatcgtcaacaggttctgcaggca
ttaaagccgctgctggaagatcctgaaaaaaccaaaattggtcagaaccttaagtacgat
atttccgtgctggcaaactatgatattcgcgtggcggggccgcttgccgacactatgcta
gcctcgtacgtgttgaattccaccgccacgcgtcatgatatggattcgctggcgctgaag
tatttgggcgaaaaaaccatctctttcgaagagatcgctggaaagggtgccaagcagctc
acgtttaatcagatcgccttagagcaagcggttccttatgcctgtgaagatgtcgatatc
acgctgcggctgcaagaaatactgcgccctcaggtggagcgggaagggcgtttggcggac
gtgttggatcatcttgagctgccgctgattaacgtcttgtcgcggattgaacgcaatggc
gttgcgctggatgccgaacgtctgcacgagcaaagccagcaactagagcgccgtattcgt
gagcttgaaagcgaagccttcgagttagcaggccgtgaatttaaccttggttcgcccaaa
cagctggggcagattctgttcgaagagcagaaaattccggtgatcaagaaaacgcccaaa
ggcgcaccttcgaccgcagaggcagtgctagaggagttggcgctggattaccccttgccc
aaggtgattatgcagcaccggggactggcgaagctaaaatccacctataccgataagctg
ccgcgcttgctcaataaaaccactgggcgggtgcatactagctatcaccaagcagtaacg
gcgacaggacgtctttcgtcgtctgaccccaacctgcaaaacatcccgattcgtacggaa
gaaggacgtaaaatccgccaagcgtttgtggcgcgcccaggctaccgcattgtggcggca
gactactcgcaaattgagctgcgtattatggcgcacctctccgaagataaaggacttctg
gaagcgtttgcggaagggcgagatatccatacagcgaccgctgccgaagtatttggtact
gcgcttgaaaaggtctccgccgaccagcggcgcagcgctaaagcgatcaactttggcctg
atttacggcatgagcgcttggggcttatcacgccagctgcatattgatcgtaatcaggcg
caaacctacatcgaccgctattttgaccgttatcctggcgttgctcgctatatggatcgt
attcgcacccaagccgcggaagatggttttgttgaaaccgtgcttgggcggcggctgtac
ctgccagagatccactcgcaaaaccgcaatcgccgtcagggtgctgaacgcaccgccatt
aacgcgcctatgcagggcacggcagcagatatcatcaagcaggcgatgatcgatgtcgat
gcatggcttgctgaaggggagtttgatgcccttatggttatgcaggtgcatgatgaactg
gtgttcgaagtggccgaaggacaagttgaggcgtttattgagcaggtccaaacgcgcatg
caggccgctgccacgcttagtgtgccgctgattgttgaagccgaaagcggcagcaactgg
gatgaagcccactag
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