Vreelandella venusta: EI420_19865
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Entry
EI420_19865 CDS
T05892
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hvn
Vreelandella venusta
Pathway
hvn03420
Nucleotide excision repair
hvn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EI420_19865
03430 Mismatch repair
EI420_19865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvn03400
]
EI420_19865
Enzymes [BR:
hvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EI420_19865
DNA repair and recombination proteins [BR:
hvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EI420_19865
MMR (mismatch excision repair)
Other MMR factors
EI420_19865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AZM97774
LinkDB
All DBs
Position
4339548..4341746
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AA seq
732 aa
AA seq
DB search
MDDVTAILDQLNPAQREAVSAPQGNLLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYSLLA
VTFTNKAAREMRTRLEALLSLSMRHVWVGTFHSIAHRLLRTHWQDARLPQHFQIIDSDDQ
LRLVKRMLKDYSIDDERFPPRQVQGFISGCKEEGLRPHQVNVDGDGYLGQMVELYERYQF
ICERGGLVDFGELLLRSLELLRDNPPLLNHYRERFGHVLVDEFQDTNTLQYAWLKLLTGL
QTPMTAVGDDDQSIYGWRGAKVENIRRFEEEFPNTHTVRLEQNYRSTSAILEAANTLISH
NSERLGKNLWTDGVEGDPISVYAGFNDLEEARYIVDTIKEKVDEGFNRRDIAILYRSNAQ
SRLLEETLIRQGMPYRIYGGHRFYERLEIKNALAYLRLLLNRDDDASLERVINVPTRGIG
TRTVEIVRHRAREQSISLWQALHDAIQDGTLKGRAANALQTFANLIEQLDNDASGLPLHE
IIDHITTHTGLIEHHKSERGEKGQARVENLEELVTAARAFTHGDAFETPEAGEGMAALEA
FLSEAALNAGDHEADEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSIEEPGRLE
EERRLCYVGVTRAMQKLYLTHAETRRLHGKEVFPRPSRFLRELPPHLLEEVRLRGHISRP
VTASRSSFAQQRVESDGDLPALHVGQRVMHPVFGEGIILNAEGEGARARVQVSFEGEGVK
WLVLGFAKLVSL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgatacttgatcagctcaaccctgcccagcgcgaggcagtaagc
gcaccccaaggtaacttactggtactggcgggtgccggatccggtaaaacccgcgtgctg
gttcatcgtatagcttggctaatgcaggccgaagggctttcgccttactccctgctggcg
gtcacgtttaccaacaaggccgcgcgtgaaatgcgcactcgtctggaagctctgctgagc
ctctccatgcggcatgtatgggtcggcacgtttcactctattgcccatcgcctactgcgc
acccattggcaggatgcccgactgccacaacacttccaaattatcgactccgatgaccag
ctacggttggtaaaacggatgctcaaagattattccattgatgatgaacgctttccgccc
cgccaggtgcaaggcttcatctctggctgcaaagaggaaggtcttcgcccccaccaagtc
aacgtggacggcgatggttatcttggccagatggtagagctttatgagcgctatcaattt
atctgcgaacgcggcggcttagtagacttcggtgaactattactgcgcagcctagagctg
ttacgtgacaacccaccgttgctaaaccattaccgcgagcgttttggtcatgtattagtc
gatgagtttcaggacaccaatacgctgcaatacgcgtggttaaaactactcactgggctg
caaacaccaatgactgccgtcggcgacgatgaccagtccatttatggttggcgcggcgct
aaagtggaaaatattcgccgctttgaggaggagtttcctaacacacacaccgtacgccta
gagcagaactaccgctccacaagcgcgattctggaggccgccaacacgctgatcagtcat
aacagtgagcggctgggtaaaaatctgtggactgacggtgtcgaaggcgaccctatttct
gtctacgccgggtttaacgatttagaagaagcccgctatatcgtcgataccatcaaagag
aaagtcgatgaagggtttaatcgccgcgacattgccattctttaccgctctaatgctcaa
tcgcgcttactggaagagacgctgatccgccaaggtatgccctaccgtatttacggagga
catcgcttctatgagcgcttagagatcaagaatgctttagcttacctgcgcctactgctt
aatcgtgatgatgatgcctctttggagcgcgtgattaacgtgcccacccgcgggattggc
acccgcacggtagaaattgtgcgccatcgcgccagggagcaaagcatttcactgtggcaa
gcgctgcacgatgccatccaagacggcacgctaaaaggccgtgccgccaacgcgttgcag
acatttgccaacctcatcgaacaattagacaacgatgcatctggcttgccgctgcatgaa
attatcgatcacatcactacgcataccggcctgatcgagcatcacaagagcgagcgcggc
gaaaaaggccaagcgcgggtagaaaacctggaagagttggtgactgctgcgcgcgccttt
acccatggcgatgccttcgagaccccagaggcaggcgaaggcatggcagcgctggaagca
tttctttccgaagcggcacttaatgccggcgaccatgaagccgatgagtttgaagacagt
gtgcagctgatgactctgcactctgccaagggcttagagtttcccgtggtgtttattgcc
ggcgttgaagagggcctgtttcctcataaaatgtcgatcgaagagccagggcggctcgaa
gaggaaagacgactttgctatgtcggcgttacccgtgcgatgcagaaactctacctgacc
catgccgaaacccgccgcctgcacggcaaagaggtatttcccaggccatcgcgctttcta
cgtgaacttccgccccacctgctggaagaagtccgcctacgtggccatatttcccgcccc
gttactgcctcacgttcaagctttgcgcaacagcgggttgaaagcgacggcgacctgcct
gccctgcatgttggccagcgggtaatgcatccggtgtttggcgaaggcatcattctaaat
gcagaaggcgaaggtgctcgcgcccgcgtacaggtcagctttgaaggtgagggggtgaaa
tggctcgtactagggtttgccaaactcgtctcactttga
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