Vreelandella venusta MA-ZP17-13: EI420_20040
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Entry
EI420_20040 CDS
T05892
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
hvn
Vreelandella venusta MA-ZP17-13
Pathway
hvn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EI420_20040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvn03021
]
EI420_20040
03400 DNA repair and recombination proteins [BR:
hvn03400
]
EI420_20040
Enzymes [BR:
hvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EI420_20040
Transcription machinery [BR:
hvn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EI420_20040
DNA repair and recombination proteins [BR:
hvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EI420_20040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF4322
Motif
Other DBs
NCBI-ProteinID:
AZM97808
UniProt:
A0AAP9ZCZ0
LinkDB
All DBs
Position
complement(4378829..4379089)
Genome browser
AA seq
86 aa
AA seq
DB search
MARVTVEDCLENVENRFKLVMISTQRARQLARGSREAQLPWENDKPTVMALREIAAGLVD
HSVLDEPVEAPVRTRPAMTPTTHIDD
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtaaccgttgaagattgtctagaaaatgttgagaaccgcttcaagctggtg
atgatttctacccagcgcgcgcgccagcttgcccgtggctcccgtgaagcgcagctgccc
tgggagaacgataaacctaccgttatggctctgcgtgaaatagccgccggcttggtcgat
cacagcgtgctagatgagccggttgaagccccggttcgtacgcgcccagcaatgacgcct
acgacacatatcgacgactaa
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