Haloferax volcanii DS2: HVO_0003
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Entry
HVO_0003 CDS
T01200
Symbol
polD1
Name
(GenBank) DNA-directed DNA polymerase D exonuclease subunit DP1
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
hvo
Haloferax volcanii DS2
Pathway
hvo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HVO_0003 (polD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvo03032
]
HVO_0003 (polD1)
Enzymes [BR:
hvo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HVO_0003 (polD1)
DNA replication proteins [BR:
hvo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
HVO_0003 (polD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADE03232
UniProt:
D4GYJ9
LinkDB
All DBs
Position
2942..4543
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AA seq
533 aa
AA seq
DB search
MPLETPARIVRTLVGRGYNAEREAVTLIAGSDDPGRTLARVVEAAPDDALRITADHVREV
LASAPAADPSGTEPTPPAAADAANAADADPAASAASDPSVSAATSHDNAAHTDQSAPAEA
QGTPGGRNVDPALRSLEIANDMTGQSTGTGEYDDFVKVFRDRYEKLSKLLRGRVNHRPAK
AISNMSGGEDAELIGLVDDVRSTKSGHWIIDLEDTTGTFPCLVMKDKDIAGYVDELLMDE
CIAVQGTLSGDAGILFVDSMHFPDVPRSHRSNTADRDVQAALISDVHVGSQEFMADAWNR
FADWLHTEEAARIEYLLIAGDMVEGVGVYPNQDEELDVIDIYEQYEAFSEHLKSVPGDLE
IVMIPGNHDAVRLAEPQPGFDDELRDIMSAHDARITSNPSMVTLEGVNVLMYHGVSLDEV
IAELPADKASYDEPHKAMYQLLKKRHVAPQFGGHTRLAPEELDYLVMEDVPDIFHTGHVH
KLGWGKYHNVLAVNSGCWQAQTDFQKSVNIDPDAGYAPIVDLDTLNMTVRKFS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
gtgccactggagacgccggcgcgcatcgtccggacgctcgtcggtcgcggctacaacgcc
gaacgcgaggccgtgaccctcatcgccggctccgacgaccccggccgaaccctcgcccgc
gtcgtcgaagccgccccggacgacgcgcttcgcatcaccgccgaccacgtccgcgaggtg
ctcgcgtccgcccccgccgcggacccgtcgggaaccgaaccgacgcccccggccgctgcg
gacgctgcgaacgccgcggatgccgacccagccgcctccgccgcatcagacccctccgtt
tccgctgcaacatcgcacgacaacgcggcccacaccgaccagtctgctccagccgaagcg
caggggacaccgggcggccggaacgtcgacccggcgcttcggtccctcgaaatcgccaac
gacatgaccggccagtcgacgggtaccggcgagtacgacgacttcgtgaaggtgttccgc
gaccgctacgagaagctctcgaaactgctccgcgggcgcgtcaaccaccgccccgcgaag
gccatctcgaacatgtccggcggcgaggacgccgaactcatcggcctcgtcgacgacgtg
cgctccaccaagagcggccactggattatcgaccttgaggacacgacggggacgttcccc
tgtctcgtgatgaaggacaaggacatcgcgggctacgtcgacgaactcctcatggacgag
tgcatcgcggtgcaggggacgctgtcgggcgacgcgggcatcctcttcgtcgactcgatg
cacttccccgacgtgccgcggagccaccgctccaacaccgccgacagggacgtgcaggcg
gcgctcatctccgacgtgcacgtcggcagtcaggagttcatggccgacgcgtggaaccgc
tttgccgactggctccacaccgaggaggcagcgcgcatcgagtacctcctcatcgccggc
gacatggtcgaaggcgtcggcgtctacccgaatcaggacgaagaactcgacgtcatcgac
atctacgagcagtacgaggcgttctccgagcacctcaaatcggtgcccggcgacctcgaa
atcgtgatgattccgggcaaccacgacgcggtccgactcgcggagccccaacccggcttc
gacgacgaactccgcgacatcatgtcggctcacgacgcccgcatcacgagcaatccctcg
atggtcacgctcgaaggcgtcaacgtcctcatgtaccacggtgtctcgcttgacgaggtc
atcgccgaactgccggccgacaaggcgagctacgacgagccgcacaaggcgatgtaccag
cttttgaaaaagcgtcacgtcgcgccgcagttcgggggccacacccgcctcgcgcccgag
gaactcgactacctcgtcatggaggacgtgcccgacatcttccacaccggccacgtccac
aagctcggttggggcaagtaccacaacgtcctcgcggtcaactccggctgctggcaggcc
cagaccgacttccagaaatcggtcaacatcgaccccgacgccggctacgcgcccatcgtc
gacctcgacacgctgaacatgacggtccggaagttctcctga
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