Haloferax volcanii DS2: HVO_0175
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Entry
HVO_0175 CDS
T01200
Symbol
pcnA
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
hvo
Haloferax volcanii DS2
Pathway
hvo03030
DNA replication
hvo03410
Base excision repair
hvo03420
Nucleotide excision repair
hvo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HVO_0175 (pcnA)
03410 Base excision repair
HVO_0175 (pcnA)
03420 Nucleotide excision repair
HVO_0175 (pcnA)
03430 Mismatch repair
HVO_0175 (pcnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvo03032
]
HVO_0175 (pcnA)
03400 DNA repair and recombination proteins [BR:
hvo03400
]
HVO_0175 (pcnA)
DNA replication proteins [BR:
hvo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
HVO_0175 (pcnA)
DNA repair and recombination proteins [BR:
hvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
HVO_0175 (pcnA)
MMR (mismatch excision repair)
Other MMR factors
HVO_0175 (pcnA)
TLS (translesion DNA synthesis) factors
Other TLS factors
HVO_0175 (pcnA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Motif
Other DBs
NCBI-ProteinID:
ADE03802
UniProt:
D4GZB9
LinkDB
All DBs
Position
complement(157928..158671)
Genome browser
AA seq
247 aa
AA seq
DB search
MFKAIVSAATLRDALDSVSVLVDECKIRLNEESLSIRAVDPANVGMVDLTLDAAAFESYE
AHGGVIGVNLSRLEEVAGMAGAGDLIHLTLDEETRKLNIRIDGLSYTLALIDPDSIRQEP
DIPDLDLAANIVLEGTHLDRGIKAADMVSDHIRLRVDGAEETFHIEAEGDTDDVDLSLPP
ADLISIEAGAADSLFSLDYLKDMNKAIPTDAEVTVELGEEFPVKLHYQIAEGMGTITYML
APRIQSD
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggccatcgtgagcgccgcgacgctccgggacgcgctcgactccgtgagcgtc
ctcgtcgacgagtgtaagattcgactcaacgaggagagcctctccatccgcgccgtcgac
cccgcgaacgtcggcatggtggacctcacgctcgacgcggcggcgttcgaatcctacgaa
gcccacggcggcgtcatcggtgtcaacctctcgcgcctcgaagaggtcgccgggatggcg
ggcgcgggcgacctcatccacctcacgctcgacgaggagacgcgcaagctcaacatccgc
atcgacgggctgtcgtacacgctcgcgctcatcgaccccgactcgattcgccaggagccc
gacattccggacctcgacctcgcagcgaacatcgtcctcgaagggacgcacctcgaccgc
ggtatcaaggcggccgacatggtttcggaccacatccgcctccgcgtcgacggcgccgaa
gagacgttccacatcgaggccgaaggcgacaccgacgacgtggacctgtcgcttcccccg
gcggacctcatcagcatcgaagccggcgcggccgactcgctgttctcgctcgattatctc
aaagacatgaacaaggcgattccgaccgacgccgaggtcaccgtcgaactcggcgaggag
ttcccggtcaagcttcactaccaaatcgctgaggggatgggcaccatcacgtacatgctc
gccccgcgcatccagagcgactga
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