Haloferax volcanii DS2: HVO_0415
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Entry
HVO_0415 CDS
T01200
Symbol
uvrD
Name
(GenBank) repair helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hvo
Haloferax volcanii DS2
Pathway
hvo03420
Nucleotide excision repair
hvo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HVO_0415 (uvrD)
03430 Mismatch repair
HVO_0415 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvo03400
]
HVO_0415 (uvrD)
Enzymes [BR:
hvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HVO_0415 (uvrD)
DNA repair and recombination proteins [BR:
hvo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HVO_0415 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HVO_0415 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
Herpes_ori_bp
AAA_11
AAA_12
SRP54
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ADE05005
UniProt:
D4GRV6
LinkDB
All DBs
Position
complement(369241..371091)
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AA seq
616 aa
AA seq
DB search
MSESDVTVTRLFGGPGSGKTTALLDKVEEILEQDGVTIRDILVVSYTRAAAAEVRDRLAE
RLDINPRSLKGNVSTMHAKAYELLSLSRNDVVGESDKQEFCEDYGVEFEDEYGGAGRRTA
RSTTIGNKVIATSQWLQRTRRDVSDWYDVPFQWNVEEVRLPPEVDPNAQEGNKYTPTWPS
DDDRIDIPEAIRAWRAYKGEHGLVGFADMLERVKQRALVPNVDYLVIDEFQDITTLQYDV
YEEWKPHMRGVLIAGDDDQVVYAWQGADPNLLLDAERDNDEILPNSYRLPSNVLNVVNRE
IRHIDKRQEKDLKPRKEGGAVEAVESPSMLELARNVRYTVEKDEGTVMVLFRARYQMFQF
IDEFLPSGIPFSTLTDQRMWTDRLTQYVRAVEALDAEEPVNGLEARRLADMLQDSAFGTN
DRDDLFDAIDDRQEEVGVDDITNIEFTPKEIKNFAPFAPDSSSASDMVRKVTSFQRKSVN
AYFGGGYEEMDPSRVRVGTIHSAKGREADHVFMATDLTEKVVEQMAASVSDEELEARGIE
EFTATTSPVPLITDNERRVFYVGMSRARERLIVLENLVTGAPTLPISVLLHNEIREEPAQ
GLVDDAQELPAPEPEA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatccgacgtgaccgtcacccggctgttcggcggcccgggaagcgggaagacc
acggccttgctcgacaaggtcgaggagattctcgaacaagacggcgtcaccatccgcgac
attctcgttgtctcttacacccgagccgcggcggccgaggtccgcgaccgactcgctgag
cgactcgacatcaacccccggtcgctgaaggggaacgtctcgacgatgcacgcgaaggcg
tacgaactcttgagcctctcgcggaacgacgtggtcggcgagagcgacaaacaggagttc
tgcgaggactacggcgtcgagttcgaagacgagtacggcggcgcgggccgtcggaccgcc
cgctcgaccaccatcgggaacaaggtcatcgccacgagccagtggctccagcgcacccgc
cgcgacgtgtccgactggtacgacgtgccgttccagtggaacgtcgaggaggtccgcctc
ccgccggaagtcgacccgaacgcgcaggaagggaacaagtacacgccgacgtggccgtcc
gacgacgaccgcatcgacatccccgaggccatccgcgcgtggcgcgcctacaagggcgaa
cacgggctggtcggattcgctgacatgctcgaacgcgtcaagcagcgcgcgctcgtcccc
aacgtcgactacctcgtcatcgacgagttccaggacatcacgaccctccagtacgacgtg
tacgaggagtggaagccccacatgcggggcgtcctcatcgccggcgacgacgaccaggtc
gtctacgcgtggcagggcgcggacccgaacctcctcctcgacgccgaacgcgacaacgac
gagattctgccgaactcctaccgcctcccgtcgaacgtcctcaacgtcgtcaaccgagag
attcgccacatcgacaagcgacaggagaaggacctcaagccgcgcaaggaaggcggcgcg
gtcgaggccgtcgagagtccgtcgatgctcgaactcgcccggaacgtccgctacaccgtc
gagaaagacgagggcaccgtgatggtgctgttccgcgcgcgctaccagatgttccagttc
atcgacgagttcctcccgtcgggcatccccttctcgacgctgaccgaccagcgcatgtgg
accgaccggctcacgcagtacgtccgcgcggtcgaggcgctcgacgccgaagagcccgtc
aacgggctggaggcccgtcgcctcgcggacatgctccaggactccgcgttcggcacgaac
gaccgcgacgacctcttcgacgccatcgacgacagacaggaggaagtcggcgtcgacgac
atcacgaacatcgagttcacgccgaaggaaatcaagaacttcgcaccgttcgcccccgac
agttcgtccgcgagcgacatggtccgcaaggtgacgagcttccagcgcaagtccgttaac
gcgtacttcggcggcggctacgaggagatggaccccagtcgcgtccgcgtcggcaccatc
cactccgcgaagggtcgcgaggccgaccacgtgttcatggcgaccgacctgaccgagaag
gtggtcgagcagatggcggcgtccgtctccgacgaggagctcgaagcccgcggcatcgag
gagttcaccgcgacgacgagccccgtcccgctcatcaccgacaacgagcgccgcgtcttc
tacgtcgggatgtcccgcgcccgcgagcgcctcatcgtcctcgaaaacctcgtcaccggc
gcgccgacgctccccatcagcgtcctgctccacaacgagattcgcgaggaacccgcgcag
ggactcgtcgacgacgcgcaggaactgcccgcgcccgaaccagaggcgtaa
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