Haloferax volcanii DS2: HVO_0519
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Entry
HVO_0519 CDS
T01200
Symbol
rpa2
Name
(GenBank) replication protein A
KO
K07466
replication factor A1
Organism
hvo
Haloferax volcanii DS2
Pathway
hvo03030
DNA replication
hvo03420
Nucleotide excision repair
hvo03430
Mismatch repair
hvo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HVO_0519 (rpa2)
03420 Nucleotide excision repair
HVO_0519 (rpa2)
03430 Mismatch repair
HVO_0519 (rpa2)
03440 Homologous recombination
HVO_0519 (rpa2)
03460 Fanconi anemia pathway
HVO_0519 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvo03000
]
HVO_0519 (rpa2)
03032 DNA replication proteins [BR:
hvo03032
]
HVO_0519 (rpa2)
03400 DNA repair and recombination proteins [BR:
hvo03400
]
HVO_0519 (rpa2)
Transcription factors [BR:
hvo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
HVO_0519 (rpa2)
DNA replication proteins [BR:
hvo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
HVO_0519 (rpa2)
DNA repair and recombination proteins [BR:
hvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
HVO_0519 (rpa2)
MMR (mismatch excision repair)
HVO_0519 (rpa2)
DSBR (double strand breaks repair)
HR (homologous recombination)
HVO_0519 (rpa2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
OB_Ssb-like
SSB
DUF5666
HROB
Motif
Other DBs
NCBI-ProteinID:
ADE04299
UniProt:
D4GS55
LinkDB
All DBs
Position
453269..454720
Genome browser
AA seq
483 aa
AA seq
DB search
MGVIREVYDDLDTDVEFEEFEAAVNDKVEQMGGLADEETAAMLIAHELRDEEVNGIADIE
PGMEDVKFLAKVVSIGEVRTFERDGEDEDGRVVNIEVADETGRIRVSLWDEMAAGAKENL
EVGTVLRIGGRPKDGYNGVEVSASKVEEDLDAEVDVQVLDSYRVEDLALGLSDVNLEGKI
LDAGTVRTFDRDDGTEGRVSNLSVGDPTGRVRVTLWDERADLAEELEPGQSVEVVDGYVR
ERDGSLELHVGSRGAVEPIDEDIEYVPETTDIGSLELGQTVDIAGGVIEADGKRTFDRDD
GSEGQVRNIRVKDGTGDIRVALWGEKADADVDLADYVVITDAEIKEGWQEDLEASAGWRS
SVAVMDEAPEGAAGTDAGGSAPTPPSDEGLGAFSGDGSSDDTSAANGGSSSDASAAESTG
EAVEFTGTVVQAGTPVILDDGTQTKTVDTDADLGLGDEVTVSGTETDGRISAESVEVHTG
AQQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcatccgggaggtctacgacgacctcgacaccgatgtcgagttcgaggagttc
gaagcggcggtcaacgacaaggtcgaacagatgggcggcctcgccgacgaggagacggcg
gcgatgctcatcgcccacgaactgcgcgacgaggaggtcaacggcatcgccgacatcgaa
cccggcatggaggacgtgaagttcctcgccaaggtcgtcagcatcggcgaggttcggacg
ttcgagcgcgacggcgaggacgaagacgggcgggtcgtcaacatcgaggtcgccgacgag
accggtcgcatccgcgtctcgctgtgggacgagatggccgccggcgcgaaggagaacctc
gaagtcggcaccgtcctccgcatcggcggtcgcccgaaggacggctacaacggcgtcgaa
gtcagcgccagcaaggtcgaagaggacctcgacgccgaggtcgacgtgcaggtgctcgat
agctaccgcgtcgaggacctcgcgctcggcctctcggacgtgaacctcgaaggcaagatt
ctcgacgccggcaccgtgcgaacgttcgaccgcgacgacggcaccgagggccgcgtctcg
aacctctcggtcggtgatccgaccggtcgcgtccgcgtcacgctctgggacgagcgggcg
gacctcgccgaagaactcgaacccggccagtcggtcgaggtcgtcgacggctacgtccgc
gagcgcgacggctcgctcgaactccacgtcggctcccgcggcgcggtcgaacccatcgac
gaggacatcgagtacgtccccgagacgaccgacatcggctcgctcgaactcggtcagacg
gtggacatcgccggcggcgtcatcgaggcagacgggaaacgcaccttcgaccgcgacgac
ggctccgaggggcaggtccgaaacatccgcgtcaaggacggcaccggcgatatccgggtc
gccctctggggcgagaaagccgacgccgacgtggacctcgcggactacgtcgtcatcacc
gacgcggagataaaagagggctggcaggaggacctcgaagcctccgccggctggcggtcg
tccgtcgccgtgatggacgaggcacccgagggcgcggccggcaccgacgccggcgggtcg
gcaccgacgccgcccagcgacgaaggcctcggcgcgttctccggcgacgggtcgtccgac
gacacgtccgccgcgaacggcgggtcctcgtcggacgcgtccgcggccgagtccaccggc
gaggcggtcgagttcaccgggacggtcgtacaggccgggacgccggtcatcctcgacgac
ggcacgcagaccaagaccgtcgacaccgacgccgacctcggcctcggcgacgaggtgacc
gtctccgggacggagaccgacggccgcatcagcgccgagtcggtcgaagtccacactggc
gcacagcagtag
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