Haloferax volcanii DS2: HVO_0658
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Entry
HVO_0658 CDS
T01200
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hvo
Haloferax volcanii DS2
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hvo03016
]
HVO_0658 (truD)
Enzymes [BR:
hvo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HVO_0658 (truD)
Transfer RNA biogenesis [BR:
hvo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HVO_0658 (truD)
Prokaryotic type
HVO_0658 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADE03492
UniProt:
D4GSR8
LinkDB
All DBs
Position
complement(587495..588886)
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AA seq
463 aa
AA seq
DB search
MREAHPLERAVGIDSYVSDADGVGGRLRVAPEDFRVRELELDSLNVRPPDAPTGDFPNLV
LRVTLRGWDTNDFAGRLSDELGASRERVSWAGTKDKHAVTTQLFTVNGGDAADVPEVPNA
DIEVVGRLGRTLDFGDLAGNGFRIRVRDPETPDNAAAVTDALTEFGGREGRVGVPNFFGH
QRFGSIRPITHTVGLHVVRGEWREAVLAYCGGPTEDEPEETQAGRAVVDEEAASADPDWH
RALDRIPGYLGYERGMLHRLAEDGAETDEDWRNALESVPSNLQRLFVNAAQSYAFNRMLS
ERRDRGLPFDEPVEGDVVCFADRDAPGGLELPDVSRLQTATGRRVDVMSRHIERGRAFVT
APLVGTDTELAEGEQGDIERAVLDDLDLEPGDFDLPGNFRSTGTRRAILVRTDLDVERES
GDDDADTDAAGGADDLVFDFALPHGSYATAVMREYLKAGPLDL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcacacccgctcgagcgcgcggtcggcatcgacagctacgtgagcgacgcc
gacggcgtcggcggccgcctccgcgtcgcccccgaggacttccgcgtgcgcgaactcgaa
ctcgactcgctgaacgtccgcccgccggacgcgccgaccggcgacttcccgaacctcgtc
ctccgcgtcacgctccgcggctgggacaccaacgacttcgccggccggctctctgacgaa
ctcggcgcgagcagagagcgcgtctcgtgggccggcacgaaggacaaacacgccgtgacg
acccaactgttcaccgtcaacggcggcgacgccgccgacgtgccggaggttccgaacgcc
gacatcgaggtcgtcggtcgcctcggccgcacgcttgacttcggtgacctcgcgggcaac
ggcttccgcatccgcgtccgcgaccccgagacccccgacaacgccgcggccgtcaccgac
gcgctcaccgagttcggcggccgcgagggtcgcgtgggcgttccgaacttcttcggccac
cagcggttcggcagcatccgccccatcacccacacagtcggtctccacgtcgtccgcggc
gagtggcgcgaggccgtgttggcgtactgcggcggaccgaccgaggacgaacccgaggag
acacaggcgggtcgcgccgtcgtcgacgaggaagccgcgtcggccgaccccgactggcac
cgcgcgctcgaccggattccgggctacctcggctacgagcgcggcatgctccaccgcctc
gcggaggacggcgcggagaccgacgaggactggcgcaacgcgctcgaatcggtcccgtcg
aacctccagcgactgttcgtcaacgccgcgcagtcctacgcgttcaaccggatgctctcg
gagcgccgagaccgcggcctcccgttcgacgaacccgtcgagggcgacgtggtctgcttc
gccgaccgcgacgcgcccggggggctggaactccccgacgtgagccgcctccagaccgcg
acgggccgccgcgtcgatgtcatgagccgccacatcgagcgcggtcgcgcgttcgtcacg
gccccgctcgtcggcaccgacaccgaactcgcggagggcgaacagggcgacatcgagcgg
gccgtcctcgacgacctcgacctcgaaccgggcgacttcgacctccccggcaacttccgg
tcgaccgggacgcgccgggcgattctcgtccgcaccgacctcgacgtagagcgcgagagc
ggcgacgacgacgccgacaccgacgccgctggcggcgctgacgacctcgtcttcgacttc
gcgcttccccacggctcgtacgcgacggccgtgatgcgcgagtatctgaaggccggcccg
ctggacctctga
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