Haloferax volcanii: HVO_0689
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Entry
HVO_0689 CDS
T01200
Symbol
smc
Name
(GenBank) chromosome segregation protein Smc
KO
K03529
chromosome segregation protein
Organism
hvo
Haloferax volcanii
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hvo03036
]
HVO_0689 (smc)
Chromosome and associated proteins [BR:
hvo03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HVO_0689 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_13
AAA_21
ATG16
Crescentin
DUF724
MscS_porin
DUF1664
APG6_N
ERM_helical
AAA_29
CENP-F_leu_zip
DUF4201
DUF4200
AAA_15
Exonuc_VII_L
DUF4407
FliJ
EzrA
GAS
Laminin_II
TPR_MLP1_2
WEMBL
ABC_tran_CTD
IFT57
Fib_alpha
KASH_CCD
Cast
Fez1
DUF5082
Laminin_I
Seryl_tRNA_N
CEP63
Tropomyosin
NPV_P10
Wtap
Spectrin
ADIP
Filament
ATG14
Snapin_Pallidin
FlaC_arch
Baculo_PEP_C
ATG17_like
COG6_N
BST2
TMPIT
Motif
Other DBs
NCBI-ProteinID:
ADE02606
UniProt:
D4GT30
LinkDB
All DBs
Position
617591..621313
Genome browser
AA seq
1240 aa
AA seq
DB search
MHIKELVLDGFKSFGRPTRIPFYEDFTVVTGPNGSGKSNIIDGVLFALGLARTRGIRAEK
LTDLIYNPGHADGSDEAPDKPKEASVTVVLDNSEGTLDRSQVVNAAGTDKVGGVEEITIK
RRVKETPDNYYSYYYLNERSVNLSDIKDLLAQAGITPEGYNVVMQGDVTEIINMTPYQRR
GIIDEIAGVAEFDEKKDAAFEELEAVEERVDEADLRIEEKEARLDQLADERETALTYKGL
REEKEEYEGYLKAAELEDKRDDLSRTESRIESTEADLEDLQAELDERQGKVTRLEADLED
LTREIERKGEDEQLRIKSEMEEIKGDISRLENAIDAAEEKRDDAEAERRKAFVDIDRKQE
QIDDLEDDIREVKVEKASVKSDIQSKRVELSEVQAEIDSVDTEFDELKSELAERKETLDE
LKDEKNDRQRAKDRLLDDARRRSNQISETRDELERARERIPELKATVSDLHSELDTAEKN
EAKIDGVIEDLQAEKADLNDELSEVTDELQTKQSEYARLEARAGKDGDNSWPRAVTTILN
AGISGVHGAVGQLGSVDGEYAKACETAAGGRLANVVVDDDGVGSSCIGHLKSRKAGRATF
LPITKMDNRSLPREPDNPGVVDFARNLVDYDSQYESIFSYVLGSTLVVEDMETARDLMGD
YRMVTLDGDLVERSGAMTGGSGGGSRYSFSKSGEGKLDRLAKEITKLEDRRRSLNEEIRD
IDDDLDDARGRASDAADRVRTIEREIEDAEEDIEEAEAEIDRLEDRLDELQSERESVDEQ
MSDLDDEIADLDDEIETVEAEIEDIEAELADSEIPELTARADDIRADIDDLEDRMSTLDG
RLNEIQLEKQYAEDAVDDLHDTIEAAQNRKAEARESISEAESTIEEREDDLEAKREAVAE
LEEELVDLKEDRTELQDDLREARSARDEKKDRVNAVESKLESMRSAAERLEWEIDELQSQ
VGDYDPDEIPDHDTVESEIERLTEEMEELEPVNMLAIDEYDDVKADLEALQERRDVLVEE
RDAIADRIDQYESQKKATFMESFDAIAENFTDIFERLSNGTGHLQLENPDDPFEEGLTMK
AQPGDKPIQRLDAMSGGEKSLTALAFIFAIQRHNPAPFYALDEVDAFLDAANAERVGQMV
DDLAGDAQFVVVSHRSALLERAERAIGVTMQGDNVSAVTGIQFGGDGEAGSDGGDGRDAD
GPGGDDGGSGDGSDDDGDDADGGDGGEADADVEAEVPADD
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaaagagctcgtccttgacggtttcaagagcttcgggcggccgactcgcatc
ccgttctacgaggatttcacggtcgttacgggcccgaacggttccggcaaatcgaacatc
atcgacggcgtcctcttcgcgctcggcctcgcccgcacccgcgggattcgcgccgagaag
ctgacggacctcatctacaaccccggccacgccgacggcagcgacgaggcccccgacaag
cccaaggaggccagcgtcacggtcgtcctcgacaactccgaggggacgctcgaccgctcg
caggtcgtcaacgccgccggcaccgacaaagtcggcggcgtcgaggagataactatcaag
cgccgcgtcaaggagacgccggacaactactactcgtactactacctcaacgagcgctcg
gtcaacctctcggacatcaaggacctgctcgcgcaggcgggcatcactcccgagggttac
aacgtcgtcatgcagggcgacgtgaccgagataatcaacatgacgccctaccagcggcgg
ggcatcatcgacgaaatcgcgggcgtcgccgagttcgacgagaagaaagacgccgccttc
gaggagttggaggcggtcgaagagcgcgtcgacgaggcggacctccgcatcgaggaaaag
gaggcgcgcctcgaccaactcgccgacgagcgcgagaccgccctcacctacaagggactc
cgcgaagagaaagaggagtacgagggctacctgaaggcggcggagctcgaagacaagcgc
gacgacctctcgcggaccgaatcgcgcatcgagtccaccgaggcagacctcgaagacctg
caggccgaactcgacgagcgacagggcaaggtcacccgtctcgaagcggacctcgaagac
ctcacccgcgagatagagcgcaagggcgaggacgaacagctccgcatcaagtcggagatg
gaggagataaagggcgacatctcccggctcgaaaacgccatcgacgccgccgaggaaaag
cgcgacgacgccgaggccgagcgccgaaaggcgttcgtcgacatcgaccgcaagcaagaa
cagatcgacgacctcgaagacgacatccgcgaggtcaaagtcgagaaggcgtcggtcaaa
agcgacatccagtccaagcgggtcgaactctccgaggtgcaggccgaaatcgactcggtg
gacaccgagttcgacgagctgaagtccgaactcgcggagcgaaaggagacgctcgacgag
ctcaaagacgagaagaacgaccgccagcgcgccaaggaccgcctgctcgacgacgcgcgc
cgccgctcgaaccagatttcggagacccgggacgaactcgaacgcgcccgcgagcgcatc
cccgaactgaaggcgaccgtctccgacctgcacagcgaactagacaccgccgagaagaac
gaggcgaagatagacggcgtcatcgaggacttgcaggccgagaaggccgacctgaacgac
gaactttccgaggtcacggacgaactccagaccaagcagtccgagtacgcccgcctcgaa
gcccgcgctgggaaggacggtgacaactcgtggccccgcgccgtcacgaccatcctcaac
gccggtatctccggcgtccacggcgcggtcggccaactcggctcggtcgacggcgagtac
gcgaaggcctgtgagacggccgccggcggccgcctcgccaacgtcgtcgtcgacgacgac
ggcgtggggtcgtcctgtatcggccacctgaagtcccgtaaagcgggccgcgcgacgttc
ctgcccatcacgaagatggacaaccggagcctgccgcgcgagcccgacaaccccggcgtc
gtggacttcgcgcgcaacctcgtcgactacgattcgcagtacgagtcgattttctcgtac
gtcctcgggtcgacgctcgtcgtcgaggacatggagaccgcccgcgacctgatgggtgac
taccgaatggtcaccctcgacggcgacctcgtggagcgctccggcgcgatgaccggcggc
tccggcggcggctctcgctactcgttttcgaagtccggcgagggcaaactcgaccgcctc
gcgaaagagattacgaagctcgaagaccgccgccgctcgctcaacgaggagattcgcgac
atcgacgacgacctcgacgacgcccgcgggcgggcttccgacgccgccgaccgcgttcgg
accatcgagcgcgaaatcgaggacgccgaggaggatatcgaggaggccgaagccgaaatc
gaccggctcgaagaccgcctcgacgaactccagtccgaacgcgagtcggtggacgaacag
atgtccgacctcgacgacgaaatcgccgacctcgacgacgaaatcgagacggtcgaggcc
gaaatcgaggacatcgaagccgaactcgcggactccgagattccggaactcaccgcccgc
gccgacgatattcgcgcggacatcgacgacctcgaagaccggatgtccacgctcgacggc
cggctcaacgagattcaactcgaaaagcagtacgccgaggacgcggtcgacgacctccac
gacacgatcgaggccgcccaaaaccgcaaggccgaggctcgggagtccatctccgaggcg
gagtcgacaatcgaggagcgcgaggacgacctcgaagccaagcgcgaggcggtcgccgaa
ctcgaggaggaactggtcgacctcaaggaggaccgcacggagctccaagacgacctccgc
gaagctcggagcgcccgcgacgagaagaaagaccgggtgaatgcggtcgaatccaagctc
gaaagcatgcgctcggccgccgaacggctcgaatgggaaatcgacgaactccagtcgcag
gtcggagactacgaccccgacgagattcccgaccacgacacggtcgagtcggaaatcgag
cgactcaccgaggagatggaggaactcgaaccggtcaacatgctcgctatcgacgagtac
gacgacgtgaaagccgacctcgaagccctccaagaacgccgcgacgtgctggtcgaagag
cgggacgccatcgccgaccgcatcgaccagtacgagtcccagaagaaggcgacgttcatg
gagtcgttcgacgccatcgccgagaacttcacggacatcttcgagcgcctgtcgaacggg
acggggcacctccagttagagaaccccgacgaccccttcgaggagggcctgacgatgaag
gcccagccgggcgacaagccaatccagcgcctcgacgccatgtccggcggcgagaagtcg
ctgacggcgctcgcgtttatcttcgccatccagcggcacaaccccgcgccgttctacgcg
ctcgacgaggtggacgccttcctcgacgccgcgaacgccgagcgcgtcggccagatggtc
gacgacctcgcgggcgacgcccagttcgtcgtcgtctcgcaccgctctgcgctcctcgaa
cgcgccgagcgcgctatcggcgtgacgatgcagggcgacaacgtcagcgcggtcacgggt
atccagttcggcggcgacggcgaggctggaagcgacggcggtgacggccgcgacgcggac
ggtccgggcggagacgacggcggaagcggcgacggcagcgacgacgacggtgacgacgcg
gacggtggtgacggcggcgaggccgacgcggacgtggaagcggaggttccggcggatgac
tga
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