Haloferax volcanii DS2: HVO_0795
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Entry
HVO_0795 CDS
T01200
Symbol
tfb6
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hvo
Haloferax volcanii DS2
Pathway
hvo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HVO_0795 (tfb6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvo03021
]
HVO_0795 (tfb6)
Transcription machinery [BR:
hvo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HVO_0795 (tfb6)
Prokaryotic type
Archaeal type
TFB
HVO_0795 (tfb6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Anti-TRAP
Zn_ribbon_LysW
Zn_ribbon_tTFIIB
Cas12f1-like_TNB
HTH_Tnp_ISL3
DUF8054_C
Zn_ribbon_3
DNA_ligase_ZBD
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
ADE03284
UniProt:
D4GU95
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All DBs
Position
complement(714561..715568)
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AA seq
335 aa
AA seq
DB search
MSERIWTRNPGAQEQERNTQNGRQEAETEQEETKGDTLQCPECGGHVVTDDEHGETVCND
CGLVVTADSVDRGPEWRAFDAREKDEKSRVGAPTTNTMHDKGLSTNIDWRDRDAYGNSLG
ARQRQKMQRLRKWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALD
DDLLPGRSIEGVATSCTYAAARMAGVPRSLDEIAEVSRVEKSEVARTYRYIARELSLEVK
PADPEQYVPRFASELGLSDESKMRARQLLKNAKEKGVHSGKSPVGLAAAAVYAAALLTNE
KTTQAAVSDVADISEVTIRNRYHELLEAEENLGLV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacgaatctggacccgaaaccccggcgcacaggagcaggaacgaaacacgcag
aacggccgacaggaggccgagaccgaacaggaagagacgaagggcgacacgcttcagtgc
cccgagtgcggcggtcacgtcgtcaccgacgacgaacacggcgagaccgtctgtaacgac
tgcggcctcgtcgtgaccgccgactccgtcgaccgcggccccgagtggcgcgcgttcgac
gcccgcgagaaagacgagaagtcccgcgtcggcgcgccgacgaccaacacgatgcacgac
aaggggctgtcgaccaacatcgactggcgcgaccgcgacgcgtacgggaactcgctgggc
gcgcgccagcgccagaagatgcagcggctccgcaagtggaacgagcggttccgcacccgc
gactccaaggagcgcaacctcaagcaggcgctcggcgaaatcgaccgcatggcctcggcg
ctcggcctccccgagaacgtccgcgagaccgcctcggtcatctaccgccgcgcgctcgac
gacgacctgctgcccggtcgctccatcgagggcgtcgccacgtcgtgtacctacgccgcc
gcccgcatggccggcgtcccgcgctcgctcgacgaaatcgcggaggtctcgcgcgtcgag
aagagcgaggtcgcccgcacctatcgctacatcgcccgcgaactctcgctcgaagtcaag
cccgccgaccccgagcagtacgtcccgcggttcgccagcgagctcggcctctccgacgag
tcgaagatgcgcgcgcgccaactcctgaagaacgccaaggagaagggcgtccactcgggt
aagtcgccggtcggcctcgccgccgccgccgtctacgccgccgccctcctcaccaacgag
aagacgacgcaggccgccgtcagcgacgtggccgacatctccgaggtcaccatccgcaac
cgctaccacgaactcctcgaagccgaggagaacctcggcctcgtctga
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