Haloferax volcanii DS2: HVO_0854
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Entry
HVO_0854 CDS
T01200
Symbol
rad50
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hvo
Haloferax volcanii DS2
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvo03400
]
HVO_0854 (rad50)
DNA repair and recombination proteins [BR:
hvo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HVO_0854 (rad50)
Archaeal homologous recombinant proteins
HVO_0854 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_27
ABC_tran
AAA_29
DUF3584
AAA_21
Baculo_PEP_C
TMF_TATA_bd
ABC_ATPase
PTAC
FapA
ZnF_RZ-type
BLOC1_2
DUF1664
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
ADE03902
UniProt:
D4GUK1
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All DBs
Position
766356..769037
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AA seq
893 aa
AA seq
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MRFTRIAIRNFKPYEDAELDLRDGVTVIHGVNGSGKSSLLEACFFALYGSKALAGTLEDV
VTTGADDAEITLEFVHDGGEYRIDRRVRVSGDRATTAKCVLDGPEGTVEGARDVRRHVAS
LLRMDAEAFVNCAYVQQGEVNKLINATPSQRQDMIDDLLQLGKLETYRERAGNARLGVED
VLTKKRSVLEDVESQIEAKEDADLHATLNALESELDSLDEEISNYESQRDKAKSALDAAE
ATLDEHAEKRERLDEIESAIEDLTAKISADETKRDDLSERVRELDAAADELESDIDDALA
RADLDDASDEAIADAREALSARESELRDDLSEARTRAQAFETQAERLRERADDLESRAEE
KREAAEVDAETAAEAERELESFRETRAELRSALDDAEARFEDAPVELGEAADLLEERREA
RSEARESLAETETELKNARERLAEAERLRDAGKCPECGQPVEGSPHVDAISEREAAVESL
EADRESLESAVESRSAAVEAAEALVEVETRASSRRDRLDLVDERIADREETVESRREAAE
EKREAAAELDSEAEEKREAATTQAERAEEVAETVDSLESDLDTLDDRRDRLDRVESLVDT
RAEKIDARDRLREKRETLAEVNRERREHLRERRERRDELRETVDEEAVEGAKQRKKNAAA
YLERVEDEVLPELREKRDDLQSRVGGVEAELEQLDDLRERRDHLAERVDALESVHDEVST
LESTYGDLRAELRQRNVEVLERMLNETFDLVYANDAYSRIRLDGEYGLTVFQKDGTALEP
EQLSGGERALFNLSLRCAIYRLLAEGIDGAAPLPPLILDEPTVFLDGGHVSRLVDLVEDM
QSRGVKQILIVSHDEDLVGAADDLVRVEKNPTTNRSTVERTDAPIVEGALADD
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
gtgagattcacccgaatcgccatccggaacttcaaaccctacgaggacgccgaactcgac
cttcgagacggcgtcacggtcatccacggcgtcaacggcagcggcaagtcgtcgctcctc
gaagcgtgtttcttcgcgctctacggctcgaaggcgctcgcggggacgctcgaagacgtg
gtgacgacgggcgcggacgacgccgaaatcacgctcgaattcgtccacgacggcggcgag
taccgcatcgaccgccgggttcgcgtctccggcgaccgcgcgaccaccgccaagtgcgtc
ctcgacggccccgagggaaccgtcgaaggcgcgcgcgacgttcgccggcacgtcgcgtcg
ctcctgcggatggacgccgaggcgttcgtgaactgcgcgtacgtccagcagggcgaggtc
aacaagctcatcaacgcgacgccgagccagcgccaggacatgattgacgacctcctgcaa
ctcggaaagctcgaaacgtaccgcgagcgcgccggcaacgcccggctcggggtcgaagac
gtgctgacgaaaaagcggagcgtcctcgaagacgtcgagtcgcaaatcgaggccaaggag
gacgcggacctccacgcgacgctcaacgcgctcgaatccgaactcgactccctcgacgag
gagatttcgaactacgagagccagcgcgacaaggcgaagtcggcgctcgacgccgccgag
gcgacgctcgacgaacacgccgaaaagcgggagcgactcgacgaaatcgagtcggccatc
gaggacctgaccgcgaaaatctccgccgacgagacgaagcgcgacgacctctcggagcgc
gtccgggaactcgacgccgccgccgacgaactcgaatccgacatcgacgacgccctcgcc
cgggcggacctcgacgacgcgagcgacgaggcgatagccgacgcgcgagaggcgctgtcg
gcgcgcgaatccgaactgcgcgacgacctctccgaggcgcggacgcgggcgcaggccttc
gagacgcaggccgagcgcctccgcgagcgcgccgacgacctcgaatcgcgcgccgaggag
aaacgcgaggccgccgaggtcgacgcggagaccgccgccgaggccgaacgagaactcgaa
tcgttccgcgagacgcgcgcggagcttcggtcggcgctcgacgacgccgaagcgcggttc
gaggacgcccccgtcgaactcggcgaggccgccgacctgctcgaagaacgacgcgaggcg
cgctccgaggcccgcgagtcgctcgcggagacggagaccgaactgaagaacgcgcgcgag
cgcctcgccgaggccgagcgcctccgcgacgcgggaaagtgccccgagtgcggacagccg
gtcgaggggtcgccccacgtcgacgccatcagtgagcgcgaggccgcggtcgagtcgctg
gaggccgaccgcgaatcgctcgaatcggcagtcgagtcgcgctcggcggccgtcgaggcg
gccgaggcgctcgtcgaggtcgagacccgcgcgagttcccggcgcgacagactcgacctc
gtggacgaacgcatcgccgaccgcgaggagacggtcgagagtcgccgcgaggccgccgaa
gaaaagcgcgaggccgccgcggaactcgactcggaggccgaggagaaacgcgaggccgcg
acgacgcaggccgagcgggccgaggaggtcgcggagacggttgattcgctcgaatcggac
ctcgacaccctcgacgaccggcgcgaccggctcgaccgcgtcgaatcgctggtcgatacg
cgggccgagaaaatcgacgcgcgggaccggctccgcgagaagcgcgagacgctcgcagag
gtgaaccgcgagcgtcgcgaacacctccgcgagcgtcgcgagcgccgagacgaactccgc
gagacggtcgacgaggaggcggtcgagggggcgaaacagcgcaagaaaaacgccgcggcg
tacctcgaacgggtcgaagacgaggtgcttcccgagttgcgtgagaagcgcgatgacctc
cagagtcgcgtcggcggcgtcgaggccgaactcgaacagttggacgacctccgagagcgc
cgcgaccacctcgccgagcgcgtggacgccctcgaatcggtccacgacgaggtctcgacg
ctcgaatcgacctacggcgacctccgggcggagcttcgacagcgcaacgtcgaggtgctc
gaacggatgctcaacgagacgttcgacctcgtctacgccaacgacgcctactcgcgcatc
cgactcgacggcgagtacggcttgacggtgttccagaaggacggcaccgcgctcgaaccc
gaacagctctcgggcggcgagcgcgccctgttcaacctcagcctccggtgtgcaatctac
cgactcctcgccgagggcatcgacggcgcggccccgctcccgccgctcatcctcgacgag
ccgacggtgttcctcgacggcggccacgtctcgcggctggtcgacctcgtcgaggacatg
cagagccgcggcgtcaagcagattctcatcgtcagccacgacgaagacctggtcggcgcg
gccgacgacctcgtccgcgtggagaagaacccgacgacgaaccgctcgacggtcgagcgg
accgacgcgccgatagtcgaaggcgcgctcgcggacgactga
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