Haloferax volcanii DS2: HVO_1052
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Entry
HVO_1052 CDS
T01200
Symbol
tfb1
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hvo
Haloferax volcanii DS2
Pathway
hvo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HVO_1052 (tfb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvo03021
]
HVO_1052 (tfb1)
Transcription machinery [BR:
hvo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HVO_1052 (tfb1)
Prokaryotic type
Archaeal type
TFB
HVO_1052 (tfb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Zn_ribbon_LysW
Sigma70_r4
Zn_ribbon_RRN7
A2L_zn_ribbon
Zn_ribbon_PaaD
Cyclin_N
Zn_ribbon_tTFIIB
HTH_Tnp_ISL3
Lar_restr_allev
UMPH-1
Zn_ribbon_IS1595
Cas12f1-like_TNB
Zn_Ribbon_YjdM
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ADE03579
UniProt:
D4GVM8
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All DBs
Position
complement(959346..960344)
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AA seq
332 aa
AA seq
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MTESVRRFTTGNARVRNENTKDTEQTDTEREQTPTCPECGSESLVSDTEHGETVCDDCGL
VVEEDEIDHGPEWRAFNSSEKDEKSRVGAPTTNMMHDKGLSTNIGWQNKDAYGRSLSSRQ
REKMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALDDDL
LPGRSIEGVATSALYAAARMAGTPRSLDEITSVSRVEKDEIARTYRYVVRELSLEIKPAD
PEQYVPRFASDLGLSDESERRARQLLKNAKEQGVHSGKSPVGLAAAAVYAASLLTNEKVT
QNEVSEVANISEVTIRNRYHELLEAEEQVQLP
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaagtgtccgacgtttcacgaccggcaacgcgcgcgtgcgcaacgagaatacg
aaagataccgagcagaccgacaccgagcgggagcagacgcccacgtgccccgaatgcggc
tcggagagcctcgtctccgacaccgaacacggtgagacggtctgcgacgactgtgggctc
gtcgtcgaggaagacgagatcgaccacggccccgagtggcgcgcgttcaactcctcggag
aaagacgagaaatcccgcgtcggcgcgcccacgacgaacatgatgcacgacaaggggctg
tcgaccaacatcggttggcagaacaaagacgcctacgggcgctcgctgtcgtcccgccag
cgcgagaagatgcaacggcttcgcacgtggaacgagcgattccgcacccgcgactccaag
gagcgcaacctcaagcaggcgctcggtgaaatcgaccgcatggcctcggcgctcggcctt
ccggacaacgtccgcgagaccgcctcggtcatctatcgccgcgcgctcgacgacgacctg
ctgcccggtcgctccatcgagggcgtcgccacgtcggcgctgtacgccgccgcacggatg
gccggcaccccgcgctcgctcgacgagattacgagcgtctcgcgcgtcgagaaggacgaa
atcgcccgcacctaccgctacgtcgtccgcgaactctcgctcgaaatcaagcccgccgac
cccgagcagtacgtcccgcggttcgccagtgacctcggcctctccgacgagtccgagcgg
cgcgcccgacagctcttgaagaacgccaaagaacagggagtccactcgggcaagtcgccg
gtcggcctcgccgccgccgccgtctacgcggcctcgcttctcaccaacgagaaggtgacg
caaaacgaggtctccgaggtcgccaacatctccgaggtcaccatccgcaaccgctaccac
gaactcctcgaagccgaagagcaggtccaactgccctaa
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