Haloferax volcanii DS2: HVO_1351
Help
Entry
HVO_1351 CDS
T01200
Symbol
rad3a
Name
(GenBank) DNA repair helicase Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hvo
Haloferax volcanii DS2
Pathway
hvo03022
Basal transcription factors
hvo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HVO_1351 (rad3a)
09124 Replication and repair
03420 Nucleotide excision repair
HVO_1351 (rad3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvo03021
]
HVO_1351 (rad3a)
03036 Chromosome and associated proteins [BR:
hvo03036
]
HVO_1351 (rad3a)
03400 DNA repair and recombination proteins [BR:
hvo03400
]
HVO_1351 (rad3a)
Enzymes [BR:
hvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HVO_1351 (rad3a)
Transcription machinery [BR:
hvo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HVO_1351 (rad3a)
Chromosome and associated proteins [BR:
hvo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HVO_1351 (rad3a)
DNA repair and recombination proteins [BR:
hvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HVO_1351 (rad3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
AAA_22
PhoH
nSTAND3
SLFN-g3_helicase
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
ADE04644
UniProt:
D4GXN3
LinkDB
All DBs
Position
1229187..1231541
Genome browser
AA seq
784 aa
AA seq
DB search
MAVATGPQSVTWQEVFGHPEAYPEQADGIETAIQTARDDGFAVVEGACGTGKTMLALTAG
IDLVRDPDSDYERVFVLTSVKQQLRQFEADLRTINENLPTDWTPVSGLTLVGKSDVCPYS
REGCGGIDDATVYDRCEALRDRTRGLVGDGGRTSAEALAKDAREQQTGLLDTGSTAAGPD
YLETAGDPTPYPTSMPEYEDVEYCPFYANFLADLPEDGDPIEAVPFDFDDKGLIGTEDLV
SLAAGAGSCPHSVMGALLPHVEVVVGNYYHAFDPTTVGTFTGALVDDSTFVICDEAHMLE
PRVRDLVSVGVGDRTLRDAESEFTRVIQPVKFDDAGKSTVDADLVRGELQEADVTLRELE
ETRDFIRDLREELDRRVTAHLDREYGGWRADPTELDDEELPLRDPEEPGVDELTEWAEER
GHDEGTWVRAEATGSAVARILDSVEEDDKRRAAPAAGRALSTWAYADHEKHFREIELERT
WDEMEPPESWRRAYNARLSVHNCVPGEAIAERLGDFGGGVLMSATLEPIDVFRRVTGLDA
LADDGRPVAERTFGLGFPESNRASFAVDVPKFTHSNRGPPGEENETRLAYTDAAVEVCER
SPGNVLVGMPNYAEAEWMAGALEARVDKPVLLDESSDDGATERLKRDFFGGEGKVLVTSL
RGTLTEGVDYSGDKLSAAVVCGVPLINTSSPRTRAVKTAYDREFGDGFETALTVPAVRKA
RQAIGRVIRGTDEVGVRVFVDARYARDSWNGVRDYLPAQEREEFRPVSPDMLGFGLDQFW
SSAE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgcaactggaccacagagcgtgacctggcaggaggtgttcggccacccggag
gcgtacccggagcaggccgacggaatcgaaaccgcgatacagaccgcccgagacgacggg
ttcgccgtcgttgagggcgcgtgcgggaccggcaagacgatgctcgcgctcaccgccggc
atcgacctcgtccgcgaccccgactccgactacgagcgcgtcttcgtcctcacgagcgtc
aagcaacagctccggcagttcgaggccgacctccgaaccatcaacgagaacctcccgacc
gactggacgcccgtctcggggctcacgctcgtcggcaagtccgacgtgtgtccttacagc
cgcgagggctgcggcggcatcgacgacgcgaccgtctacgaccgctgtgaagccctccgc
gaccggacccgcgggctcgtcggcgacggcggccggaccagcgccgaggcgctcgccaaa
gacgctcgcgagcaacagaccggcctcctcgacaccggctcgacggccgcgggcccggac
tacctcgaaaccgcgggcgacccgacgccgtacccgacatcgatgccggagtacgaggac
gtggagtactgccccttttacgcgaacttcctcgctgacctccccgaggacggcgaccca
atcgaggccgtccccttcgacttcgacgacaagggactcatcgggaccgaagacctcgtc
tcgctggccgcgggcgcggggtcgtgtccgcactccgtgatgggcgcgctgttgccccac
gtcgaggtcgtcgtcggcaactactaccacgcgttcgacccgacgaccgtcggcacgttc
accggcgcgctcgtcgacgactcgacgttcgtcatctgcgacgaggcgcacatgctcgaa
ccccgcgtccgcgacctcgtctccgtcggcgtcggcgaccggacgctccgcgacgccgaa
agcgagttcacgcgcgtcatccagcccgtgaagttcgacgacgccggcaagtccaccgtc
gacgccgacctcgtccgcggggagcttcaggaggccgacgtgacgctccgcgaactggag
gagacccgcgacttcatccgcgacctccgcgaggagctcgaccggcgcgtgaccgcccat
ctcgaccgcgagtacggcggctggcgcgccgacccgaccgaactcgacgacgaggaactc
ccgctgcgcgaccccgaggagcccggcgtcgacgaactcaccgagtgggccgaggagcgc
ggccacgacgagggaacgtgggtccgcgccgaggcgaccggctcggcggtcgcccgcatc
ctcgactcggtcgaagaggacgacaagcgccgggccgcccccgcggcggggcgggcgctt
tcgacgtgggcctacgccgaccacgagaagcacttccgcgaaatcgaactcgaacggacg
tgggacgagatggagccgccggagtcgtggcggcgcgcgtacaacgcccggctgtcggtc
cacaactgcgtccccggcgaggccatcgcggagcgcctcggcgacttcggcggcggcgtc
ctcatgagcgcgacgctcgaacccatcgacgtgttccggcgcgtgaccggcctcgacgcc
ctcgccgacgacggccgcccggtggccgagcggacgttcggcctcggcttccccgagtcg
aaccgcgcgagcttcgccgtcgacgtgccgaagttcacccacagcaaccgcgggccgccc
ggcgaggaaaacgagacgcgactggcgtacaccgacgccgcggtcgaggtgtgcgagcgg
tcgccgggcaacgtcctcgtcgggatgccgaactacgccgaggcggagtggatggcgggc
gcgctcgaagcccgcgtcgataagcccgtcctcctcgacgagtcgtccgacgacggtgcg
acggagcgactcaagcgcgacttcttcggcggcgaggggaaagtgctcgtgacgagcctc
cgcggcacgctcaccgagggcgtcgattacagcggcgacaagctctctgccgcggtcgtc
tgcggcgtcccgctcatcaacacgtcgtcgccgcggacccgcgcggtgaagaccgcctac
gaccgcgagttcggagacggcttcgagacggccttgaccgttcccgcggtcagaaaggcg
cgacaggccatcgggcgcgtcatccgcggcaccgacgaggtcggcgtccgcgtcttcgtc
gacgctcggtacgcccgcgactcgtggaacggcgtccgcgactacctaccggcacaggag
cgcgaggagttcagacccgtcagcccggacatgctcggcttcggcctcgaccagttctgg
tcgtcggccgagtag
DBGET
integrated database retrieval system
