Haloferax volcanii DS2: HVO_1940
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Entry
HVO_1940 CDS
T01200
Symbol
mutS1a
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hvo
Haloferax volcanii DS2
Pathway
hvo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HVO_1940 (mutS1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvo03400
]
HVO_1940 (mutS1a)
DNA repair and recombination proteins [BR:
hvo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HVO_1940 (mutS1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_25
AAA_29
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ADE03837
UniProt:
D4GTG9
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Position
complement(1787523..1790288)
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AA seq
921 aa
AA seq
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MNADAQREAVYGAPPEMLAVRDDLTPMLSQYADLCEDHDDAVVLFQVGDFYEAFCGAAEA
VARTCEVTLTQREDSTGTWPMAGIPIDNAAGYLERLLDAGYRVALAEQVEDAEEASGLVD
RAVTQLITPGTVVDEELLDAGRATYLGAVARGGGNAETRDGDGDADTYGLAVVDVSTGEC
LVTGADRALALEELERLAPAELVVGPDCDLPDLPFDPMETPFEPEAFDADAARETLSAYA
PRPDAVVESAAELRAVGAALAYAEYAQGDSQLAYVTRVTRFDPREFLQLDATAIRSLELF
ESRSARAGSTLFSVLDETACALGRRRLEAWLRRPLVDRDRIEARLDAVEALFDDALARAD
LRDHLSSVYDLERLVARVSRERADARDLRSLKTTLDRVPEIRDALVGTDSDLLSDLRDSL
DELEDVRDLVGDAVVSDPPQEITEGGVIADGFDAELDDVRGTAEAGREWVSNLEAREQER
TGIDSLEVGYNQVHGYYIEVTNPNLDRVPDDYQRRQTLKNSERFYTPELKEREDEILRAS
DRADALEYDLFCEVRADVATESARVQAVADALADLDVLRTLADVAVTNDYARPEFHAGDT
DESAGIRIDAGRHPVVERAQDEFVPNPADLPRGSVALVTGPNMSGKSTYMRQVALVTLLA
QVGSFVPAKSARLPVLDRVFTRIGASDDIAGGQSTFMREMSELTEILHNATGDSLVLLDE
VGRGTSTADGLAIARAATEFLHDEVGATTLFATHYHDLTDAADDRAGVFNLHFTAARRDG
EVTFLHSVADGPSSSSYGVEVAQLAGVPASVVERARTLVDEPETDADAERATDTGRDGVA
AAANGEPDETAEDGTLAAYVDGLENGHRESENPSRATATAETTEPNPELEAVAEALREAD
LVDTTPLEALNLLSDLKGRLE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggacgcccagcgggaggcggtgtacggcgcgccgccggagatgctggcagtg
cgagacgacctgacgccgatgctctcgcagtacgccgacctctgcgaggaccacgacgac
gccgtcgtgctgtttcaggtcggcgacttctacgaggcgttctgcggcgcggcggaggcc
gtcgcccgcacctgcgaggtgacgctgacccagcgcgaggactccaccgggacgtggccg
atggcgggcatccccatcgacaacgccgcgggctacctcgaacgcctgctcgacgccggc
taccgggtcgcgctcgcggaacaggtcgaagacgccgaggaggcgtccggcctcgtcgac
cgcgcggtcacccaactcatcacgcccggcaccgtcgtcgacgaggaactgctcgacgcc
gggcgggcgacctacctcggggcggtcgctcggggcggcggcaacgccgagacccgcgac
ggcgacggcgacgccgacacctacggtctcgccgtcgtggacgtgtcgaccggcgaatgc
ctcgtcaccggggcggaccgcgcgctggcgctcgaagagctggaacgcctcgcgcccgcc
gaactcgtcgtcggtcccgactgcgacctcccggacctcccgttcgacccgatggagacg
ccgttcgaaccggaggcgttcgacgccgacgccgcccgcgagacgctgtcggcctacgcg
ccccggccggacgccgtggtcgagtcggccgccgaactccgggcggtcggcgcggcgctc
gcctacgccgagtacgcccagggcgactcgcaactggcgtacgtcacccgcgtcacgcgg
ttcgacccccgcgagttcctccaactcgacgcgacagccatccggagcctcgaactgttc
gagtcgcggagcgcccgcgcgggaagcacgctgttttcggtcctcgacgagacggcctgc
gcgctcggccgccgccgactggaggcgtggctccgccgcccgctcgtcgaccgcgaccga
atcgaggcccgactggacgccgtcgaggccctcttcgacgacgcgctcgcccgcgccgac
ctccgagaccacctctcgtcggtgtacgacctcgaacggctcgtcgcccgcgtctcccgc
gagcgcgccgacgcccgcgacctgcgctcgctgaagacgacgctcgaccgagtgccggaa
atccgcgatgcgctcgtcggaaccgattccgacctgctttcggacctgcgcgactcgctg
gacgagctcgaagacgtgcgcgacctcgtcggcgacgcggtcgtctccgacccgccgcag
gagattaccgagggcggcgtcatcgccgacggcttcgacgccgaactggacgacgtccgc
gggaccgccgaggcgggccgcgagtgggtgtcgaacctcgaagcccgcgaacaggagcgc
accggcatcgactcgctggaggtcggttacaatcaggtccacggctactacatcgaggtg
acgaacccgaacctcgaccgcgtccccgacgactaccagcgccgacagacgctgaagaac
tcggagcggttctacacgcccgaactgaaggagcgcgaggacgagattctccgcgcctcg
gaccgcgccgacgccctcgaatacgacctgttctgcgaggtgcgcgccgacgtggcgacc
gaatcggctcgggttcaggccgtcgcggacgccctcgcggacctcgacgtgctccgaacc
ctcgcggacgtggcggtgacgaacgactacgcccgacccgagttccatgcgggcgacacg
gacgagagcgccggcatccgcatcgacgccggcagacaccccgtcgtcgaacgcgcgcag
gacgagttcgtgccgaaccccgcggacctcccgcgggggagcgtcgcgctcgtcaccggc
cccaacatgtccgggaagtcgacgtacatgcggcaggtggcgctcgtcacactcctcgcg
caggtcgggagcttcgtcccggcgaaatcggcccgactaccggtcctcgaccgcgtgttc
acccgcatcggcgcgtccgacgacatcgcgggcggccagtccacgttcatgcgcgagatg
agcgagctgaccgaaatcctccacaacgccaccggcgactcgctcgtcctcctcgacgag
gtcggccgcggcacctccaccgccgacggcctcgccatcgcccgcgccgccaccgagttc
ctccacgacgaggtcggcgcgacgacgctgtttgcgacccactaccacgacctgaccgac
gcggccgacgaccgcgcgggcgtgttcaacctccacttcaccgccgcgcggcgcgacggc
gaggtcacgttcctccacagcgtcgccgacggcccctcgtcgtcgtcctacggggtcgaa
gtggcgcagttggccggcgtgcccgcgagcgtggtcgagcgggcgcgaaccctcgtggac
gaacccgagaccgacgccgacgccgagcgcgcgaccgacacaggaagggacggcgtcgcc
gccgccgcgaacggcgaacccgacgagaccgccgaagacggcacgctcgcggcctacgtc
gatgggctggagaacggccaccgagagagcgagaatccgagccgagcgaccgcgacggcc
gaaacgaccgaaccgaaccccgaactcgaagccgtcgccgaggcgctccgcgaggccgac
ctcgtggacaccacgccgctggaggcgctgaacctcctgtcggacctcaaaggaagactc
gaatga
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