Haloferax volcanii DS2: HVO_2827
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Entry
HVO_2827 CDS
T01200
Name
(GenBank) UvrD/REP family helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hvo
Haloferax volcanii DS2
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvo03400
]
HVO_2827
Enzymes [BR:
hvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HVO_2827
DNA repair and recombination proteins [BR:
hvo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HVO_2827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C_2
UvrD_C
AAA_19
AAA_22
DUF7462
Motif
Other DBs
NCBI-ProteinID:
ADE04903
UniProt:
D4GX82
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All DBs
Position
2658680..2662204
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AA seq
1174 aa
AA seq
DB search
MVSEEEATPDGPLRLKGAQREIRDEYFACDAGLFTLSCVPGSGKSATATHIAAEDLLRRY
VDGDPTPELHVAVVSFNRDEAASIVPAVCERLRVIVEHELVPAASEVSEPELKYLLQRVR
RAPFIGTIDSLLRGVLREVVHDVGFETMPSVGNEALLKRVHAECYDRISDDPACARRLER
LEAAYPSGDHDAGVAEMLERALRYCRDRRLTTEAFRVELERTRDAVYGDGEPDSFEDVVS
SVERCLGDYEAAGERARDSVSDVDRGRIVEADNALYHAWGARIEDLCETLSTYRETYRDA
VREFGVLSHIDVSYLVDAYFGGEFEDFDRELRDHVLGKYRSRIRSLIVDEAQDVSAIQHA
ALSHLVTPEVRVLGCGDVLQGIYLWRHADPSLFESATTSGRYLGIDWDVHENRTAATTYR
CVPAIASAVNTVAEPIFGDPARGNIGDLDAEYTPLEAARDEVEETAVHVSSFTGVGHPGT
STWANPDGGRGEANILATHISRGISDGTFADENGDPLGITVLFRRKSRMSDYDAAFEAEG
LRVRNASENLFDCPAVRAVFDVCDWLVDSASPEGTRRLVTESGLGLESLEGIFEANAWSV
DRVLDSADEGALTEAQRETLAALRRLRDRRDVFETFPARTYVEEVVGALALRADPHGDFG
DVDPAQRVANADALVETIAQWAGDEHHSLPDLLDLVEPFREEPDAGPTRPSSVDADYDVL
FQTVHRAKGDQDDVVVIADPGFNIWTQGPHAQRFVAQGNIAGLAPPTDASAPTDVTIPPF
DGGLYDPSDGWQRDVGLRWATARWRDTAVPTADPDVLVGPPRLRRLAENERAESWRLLYV
ALTRAMDHLMIPLPRTFPGGRPRDRWLDSIRDGLRFPDGCTETYTLAPIESDPNSERIRI
GVNDADLLARRHRKGSSTPLPEVAVRAPISDRLAPWVPRFVNPSTMYPLTKDKDRYALAH
LLGEPLHTETNDVAEDLPLVFERMGPDEVGSCVHGVLTELVKREVSERAVRSMGDEVRDV
FDEVVHEREPGIGVDERDGLFAFFSDVLDDFLESDLWARIAEAETVVVERPVDGLVSLGD
VEIEVHGEADFLTVSPSGEIHVTDVKASLTDLTEETRRRYELQVAAYGYLFDRQEASAEP
VRRTVETFGATRETVSSSWSPSIVERRLSMLTDD
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtgaggaggaggcgacacccgacggcccgctccggttgaaaggggcacagcgg
gagatcagggacgagtacttcgcctgcgacgcggggctgttcacgctcagctgcgttccc
ggttccgggaagtcggcgaccgcaactcacatcgccgcagaagacctcctccgtcggtac
gtcgacggtgatccgacccccgagctgcacgtcgcggtggtctcgttcaacagggacgag
gccgcctcgatcgttcccgcggtctgtgagcggctccgagtcatcgtcgaacacgagctc
gttccggccgcgtcggaggtgtccgaaccggaactgaagtacctcctccagcgggttcgt
cgagcgccgttcatcgggaccatcgacagcctactcaggggagtcctccgagaggtcgtt
cacgacgtggggttcgagacgatgccgtcggtcggaaacgaggcgctgttgaaacgagtc
cacgcagagtgttacgaccgaatctccgacgacccggcgtgcgcacgccgactcgaacgg
ctggaagccgcgtatccgtcgggtgaccacgacgccggcgtcgcggagatgctcgaacgg
gcgctgaggtactgccgcgaccggcggctcacgacggaagcgtttcgggtcgagctcgaa
cgaacgcgcgacgcggtgtacggagacggagagccggactcgttcgaggacgtagtatcg
agcgtggagcgctgtctcggcgactacgaggcggccggagagcgagcccgcgattcggta
agcgacgtggaccgtggccgcatcgtcgaagcggacaacgcgctgtaccacgcgtggggc
gcgcgtatcgaagacctctgcgagacgctctcgacgtaccgggagacctaccgagacgcc
gttcgtgagttcggcgtcctgtcccacatcgacgtctcgtacctcgtcgacgcgtacttc
ggcggcgagttcgaagacttcgaccgcgagctccgggaccacgtgctcgggaagtaccgg
tcccggattcggagcctcatcgtcgacgaggcgcaggacgtctcggcgatacagcacgcc
gcgctctcgcacctcgtcacgcccgaagtgcgcgttctcggctgcggggacgtcctgcag
ggaatctacctgtggcggcacgcggacccgtcgctgttcgagtcggccacgacatccggt
cggtacctgggtatcgactgggacgtccacgagaaccggaccgcggcgacgacgtaccgc
tgcgtgccggcgatcgcgtccgccgtcaacaccgtcgcggaaccgatattcggcgatccc
gcccgcgggaacatcggcgacctcgatgcggaatacactccgctggaggccgcgcgagac
gaggtcgaagagaccgccgtgcacgtctcctcgttcaccggcgtcggccatcccgggacg
tccacgtgggcgaaccccgacgggggacggggagaggcgaacatcctggcgacgcacatc
tctcgcggtatctccgacgggacgttcgccgacgagaacggagacccgctcgggatcacc
gtcctgttcaggcgcaaatcgaggatgagcgattacgatgccgcgttcgaagcggagggg
ctccgcgtccgaaacgcgagcgagaacctcttcgactgccccgcagttcgggccgtgttc
gacgtctgtgactggctcgtcgattcggcttcgccggaggggacgaggcgactcgtcacg
gagtcgggtctcggcctcgaatctctcgaagggatcttcgaagcgaacgcgtggagtgtc
gatcgcgtgctcgacagcgcagacgagggcgctctcaccgaagcccaaagagaaacgctc
gcggcgcttcgtcggctccgcgaccgccgcgacgtcttcgagacgttccccgctcggacg
tacgtcgaggaggtcgtcggagccctcgcgctcagggcggaccctcacggtgacttcgga
gacgtcgatcccgcgcagcgggtcgcaaacgcggacgcgctcgtcgagacgatagcgcag
tgggcgggtgacgagcaccactctctccccgatctactggacctcgtcgagccgttccga
gaggaaccggacgccgggccgacacggccgagttccgtcgacgccgattacgacgtgctc
ttccagacggtgcatcgcgccaagggcgaccaggacgacgtcgtcgttatcgcggaccca
gggttcaatatctggacccagggcccccacgcccagcgcttcgtcgcacagggcaacatc
gcggggctcgcgccgccgacggacgcgagcgctcccaccgacgtcacgatcccgcccttc
gacggtgggctgtacgacccgagcgacgggtggcagcgcgacgtcgggctccgttgggcg
accgctcgatggcgtgatacggctgtccccactgcagatcccgacgtcctcgtcggtcct
ccgagactccgccggttggccgagaacgagcgggccgagtcctggcggctgctgtacgtc
gcgctcacgcgtgcgatggaccacttgatgatcccgttaccgaggacttttcccggggga
cgcccgcgagaccgctggctcgactcgatccgtgacgggctccgcttcccggacgggtgt
acagagacgtacacgctcgcgccgatcgagtcggacccgaacagcgagcggatacggatc
ggcgtcaacgacgccgacctgctggcccgtcggcacaggaaggggagctcgacgccgctt
cccgaggtcgccgtgagagctcccatctccgatcgactggctccgtgggttcctcgtttc
gtcaacccgagcacgatgtatcccctcacgaaggacaaggaccgatacgcgctcgctcac
ctgctcggagaaccgctccacaccgagacgaacgacgtcgcggaggacctgccactcgtc
ttcgagcggatgggccccgacgaggtcgggtcctgcgtgcacggggtactgaccgaactc
gtcaaacgcgaggtgtcggagcgcgccgtccgatcgatgggcgacgaggtcagagacgtg
ttcgacgaggtcgttcacgaacgcgaaccgggtatcggcgtcgacgagcgggacgggctg
ttcgccttcttctcggatgtgctcgacgatttcttggaatccgacctctgggcgcggatc
gcggaggcggagaccgtcgtcgtcgagcgccccgtcgacggactcgtgtcgctcggggac
gtcgagatcgaagtccacggcgaggcggacttcctcaccgtgtctccctcgggtgagatt
cacgtcaccgacgtgaaggcgtccctgaccgatctgaccgaggagacccgacgccggtac
gaactacaggtagccgcctacggatacctcttcgaccggcaagaggcatcggcggagccg
gtgcgacggaccgtcgagacgttcggcgcgacgcgcgagaccgtctcgtcgtcgtggtcg
ccgtcgatcgtcgaacgccggttgtccatgctcacggacgattga
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