Haloferax volcanii DS2: HVO_2953
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Entry
HVO_2953 CDS
T01200
Name
(GenBank) homolog to DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hvo
Haloferax volcanii DS2
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvo03032
]
HVO_2953
03400 DNA repair and recombination proteins [BR:
hvo03400
]
HVO_2953
Enzymes [BR:
hvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HVO_2953
DNA replication proteins [BR:
hvo03032
]
Prokaryotic type
DNA Topoisomerases
HVO_2953
DNA repair and recombination proteins [BR:
hvo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HVO_2953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Auto_anti-p27
NucS_N
Zn_ribbon_Top1
Zn_ribbon_6
PsV_CP_C
Zn_ribbon_TFIIB
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
ADE03726
UniProt:
D4GY04
LinkDB
All DBs
Position
complement(2788366..2789097)
Genome browser
AA seq
243 aa
AA seq
DB search
MDSIRVFAGDCTVSFEGSRDRTQRGRVVVVAKPDRTVLVHDAGGYQPVAWLTRADSLTVE
SGPGSFGLVARAGDQTLTVDSNDVTGRAEYPASDAGVPVGSHPDTGDPLVRTNGSVVALD
SGTEYRLPAGATVLDETCDDCGLPLMRVERGAPFEVCIDRRCDPLDDHVKDRFDGEWSCP
DCGSPLRILRRSGRLLAGCDAYPECETAFSLPAGVVGDDCDCGLPTFETGRGRRCLDSTC
EGR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggattcgatacgcgtcttcgccggcgactgcaccgtcagcttcgaaggctcccgcgac
cgcacccagcgcggccgggtcgtcgtcgtggccaagcccgacagaaccgtcctcgttcac
gacgccgggggctaccagcccgtcgcgtggctgacccgcgccgactcgctgaccgtcgag
tcgggaccggggtcgttcggcctcgtggcccgcgcgggcgaccagaccctcaccgtcgac
tcgaacgacgtgaccggccgcgccgagtaccccgcgagcgacgcgggcgtcccggtcggc
tcgcatcccgacaccggcgacccgctcgtcaggaccaacggctccgtcgtcgccctcgac
tcggggaccgagtatcgcctccctgcgggcgcgaccgtcctcgacgagacgtgcgacgac
tgcggcctgccgctgatgcgcgtcgagcgcggcgcgccgttcgaggtgtgcatcgaccgc
cggtgcgacccgctggacgaccacgtgaaagaccggttcgacggcgagtggtcgtgtccg
gactgcgggtcgccgctccgaatcctccggcggagcggtcgcctgctcgccggctgcgac
gcttatcccgagtgcgagacggccttctcgctccccgcgggcgtcgtcggagacgactgc
gactgcggcctgccgacgttcgagacgggtcgcggccggcggtgtctcgactcgacctgc
gagggccgatga
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