Haloferax volcanii DS2: HVO_A0026
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Entry
HVO_A0026 CDS
T01200
Symbol
tfb9
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hvo
Haloferax volcanii DS2
Pathway
hvo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HVO_A0026 (tfb9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvo03021
]
HVO_A0026 (tfb9)
Transcription machinery [BR:
hvo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HVO_A0026 (tfb9)
Prokaryotic type
Archaeal type
TFB
HVO_A0026 (tfb9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
RB_B
DZR
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ADE01648
UniProt:
D4GQ57
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All DBs
Position
pHV4:25828..26754
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AA seq
308 aa
AA seq
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MAIRDIYQTGFDEDVRTESSANQCPECNGRVTTNAVETVCEDCGLVIDEQRIDHGPEWRA
YDKEECERTGAPLTAARHDRGLSTEIGRGTDAKGNELSGKKRRRLARMRREQTRGRWRSK
AERNLAHGLGEVRRLASALELSNSVRDQACQLFRSAQNEDLLRGRSIEAIAAASVYGACR
CNGLSRLVDDVSEVARVAESRVTNAYKTLNEALGLPAEPVLPSMFVPRLASDLECPDEIR
QRARTLAEQAEERGVTTGVHPAGFAAACLYKAGREEGRWLTQRDVAESGDVTPTTVRTHH
ETLNELAV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaattagagatatctaccaaactggcttcgacgaagacgtccgaacggagtcgagc
gcgaaccaatgtcccgagtgcaacggacgggtcaccacgaacgcggtcgaaacggtctgc
gaggactgtggcttggtcatcgacgaacagcgtatcgatcacgggccggagtggcgggcg
tacgacaaggaggagtgtgaacgaacgggcgccccgctcactgcagctcgccacgatcga
ggcttgtcaacggagatcgggcgtggcaccgacgcgaaggggaacgaactctccgggaaa
aagcggcggcgactcgctcggatgcgtcgtgaacagactcggggtcgctggcggtcgaaa
gcagaacggaatctcgcacacggattgggcgaagtgcgtcggttggcgagtgccctcgaa
ctctccaattcggtccgtgatcaggcgtgtcagctcttccggagcgcccagaacgaagat
ctgcttcgaggcagatccatcgaggccatcgccgcggccagcgtgtacggggcctgccgg
tgcaacggcctctcgcggttggtggatgacgttagcgaggtggcccgcgtcgcggagtca
cgagtcacgaacgcgtacaaaacgctgaacgaagcgctagggctcccggccgagcccgtc
ctccccagcatgttcgtgccgcgactcgcctcggacctcgagtgtccggacgagatccga
cagcgggcccgaaccctcgcggagcaggccgaggagcgcggcgtcacgaccggcgtccat
ccggctgggtttgcagcggcctgcctctacaaggccggtcgcgaggaggggcgatggctg
acgcaacgtgacgttgccgagtccggggacgtcacgccaaccacggttcggacgcatcac
gagacgctcaatgagctcgctgtctag
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