Haloferax volcanii DS2: HVO_B0316
Help
Entry
HVO_B0316 CDS
T01200
Symbol
tsgD13
Name
(GenBank) ABC-type transport system ATP-binding protein (substrate glucose)
KO
K23537
general nucleoside transport system ATP-binding protein
Organism
hvo
Haloferax volcanii DS2
Pathway
hvo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HVO_B0316 (tsgD13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hvo02000
]
HVO_B0316 (tsgD13)
Transporters [BR:
hvo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
HVO_B0316 (tsgD13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_27
RsgA_GTPase
AAA_29
AAA_30
AAA_23
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ADE01548
UniProt:
D4GPW3
LinkDB
All DBs
Position
pHV3:complement(362279..363931)
Genome browser
AA seq
550 aa
AA seq
DB search
MTREPFLRMENIVKAFPGVVANDHIDLTVERGEIHGLLGENGAGKSTLMKILYGLYSQDD
GEISLSGTRLRLDSPQDAIDAGIGMVHQHFMLIPRLTVAENVVLGEREPATPFRPDADAG
GWLPDAVRSNSLVQSLAGRFSLGLDVPERRIQELADRYGFDIDVSAKVWELGVGQQQRVE
ILKALYRDVDLLILDEPTAVLTPTEADLLFDSLERLTDEGVSIIFITHKLEEVEAVVDRV
TVLRDGENVGTVSTSDVSRADLAEMMVGREVLFTVDRERVAPGEPVLRARNVSATDDRGI
EALSNVDLTVRRGEVVGIAGVSGNGQKELAEVIAGLRTVSAGELTVDGRDLTNASPRTFI
DNGVSFVPEDRNRYGSAGDLSVMHNAAMKDFREDRFGSGVTLDYGELRAHAEALVEAFDV
RGVHDVTDATAGDLSGGNLQKLILAREISRDPDLLVANQPTRGVDVGAIESIREAILDQR
TEGTGVVLLSEDLDEIIDLSDRILVVYEGEVVYETTPEDADRERIGLEMTGGGDATATAG
AQVRGLGGSS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgacaagggaaccatttctccggatggagaacatcgtgaaagcgtttccgggcgtcgtg
gccaacgaccacattgacctcaccgtcgagcgcggtgaaatccacgggttgctcggcgag
aacggcgctggaaagagcacgctcatgaagattctgtacggtctctactcgcaggacgac
ggcgaaatctccctctccggaacgcggcttcggctggactccccgcaggacgctatcgac
gcgggaatcgggatggtccaccagcacttcatgttgattccccgtctaaccgtcgcggag
aacgtcgtcctcggcgagcgcgagccggcgacgccgtttcgcccggacgcggacgcgggc
ggatggctcccggacgccgtccgctccaattcgctcgtccagtcgctcgccgggcggttt
tcgctcggcctcgacgttccggagcggcgcatccaagaactggccgaccggtacggcttc
gacatcgacgtgagcgcgaaagtctgggagctgggcgtcggccagcaacagcgcgtcgag
attctcaaggcgctgtaccgcgatgtcgacctgctcatcctcgacgagccgacggccgtg
ttgacgccgaccgaggccgacctcctttttgactcgctcgaacgcctcaccgacgagggc
gtgtcgattatcttcatcacgcacaagctcgaggaggtcgaagcggtcgtcgaccgcgtg
accgtcctccgcgacggcgagaacgtcggcaccgtctccacgtcagacgtttctcgagcc
gacctcgcggagatgatggtcggccgcgaagtgctgttcacggtcgacagagaacgcgtc
gcccccggcgagccagtcctccgggcgcggaacgtctccgccacggacgaccgcggcatc
gaggcgctgtcgaacgtcgacctcacggttcgccgcggtgaggttgtcggcatcgccggc
gtcagcggtaacgggcagaaggaactcgcggaagtcatcgccggactccgcactgtctcc
gcgggcgaactgactgtcgacgggagggacctcacgaacgcctcgccccggacgtttatc
gacaacggcgtctcgttcgtccccgaagatagaaaccgctacggctccgcgggggacctt
tctgtgatgcacaacgcggcgatgaaggatttccgcgaggaccgcttcgggagcggggtg
acgctggactacggcgaactccgggcgcacgccgaggcgctcgtcgaggcgttcgacgtt
cgcggcgtccacgacgtgaccgacgcgacggccggcgacctctcgggcggtaacttacag
aagctcattctcgcccgagaaatctcccgtgaccccgacctcctcgtcgcgaaccagccc
acccgcggcgtcgacgtcggcgcgatagagtccatccgcgaggcgattctcgaccagcgg
accgaggggaccggcgtggtgctgctctcggaggacctcgacgagattatcgacctgagc
gaccgcatcctcgtcgtctacgagggcgaggtcgtctacgagacgacgcccgaggacgcc
gaccgcgagcgaatcgggctcgaaatgaccggcggcggggacgccaccgcgaccgcgggc
gctcaagtccgaggactcggtgggagctcatga
DBGET
integrated database retrieval system
