Candidatus Hepatoplasma vulgare: HPAVJP_0360
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Entry
HPAVJP_0360 CDS
T09842
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hvu
Candidatus Hepatoplasma vulgare
Brite
KEGG Orthology (KO) [BR:
hvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvu03032
]
HPAVJP_0360 (gyrA)
03400 DNA repair and recombination proteins [BR:
hvu03400
]
HPAVJP_0360 (gyrA)
Enzymes [BR:
hvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPAVJP_0360 (gyrA)
DNA replication proteins [BR:
hvu03032
]
Prokaryotic type
DNA Topoisomerases
HPAVJP_0360 (gyrA)
DNA repair and recombination proteins [BR:
hvu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPAVJP_0360 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BDV02147
LinkDB
All DBs
Position
38867..41389
Genome browser
AA seq
840 aa
AA seq
DB search
MDKEYTNPQEKIDSNYNKNIKEISISDEMEKSFIDYSMSVIVSRAIPDVRDGLKPVHRRI
LYAMDGLDMQYTKAFKKSARAVGEVIAKYHPHGDTSVYDALVRLAQPFSMRYPLIRGQGN
FGSVDGDSAAAMRYTEAKLEKISSFLLEDIFKNTVDFQDNYDNSEREPKVLPGKIPNLLI
NGSTGIAVGMATSIPPHNITEVLEATKAVIENPQISIEELFDEYLKAPDFPTGGIIVNPD
ELLKIYKTGRGRVIVRSKVRIEEDENGKGSKIIITEIPYMINKSKLILKIAELVKNKVID
SISDLRDESNRDGIRVVVSIKGNHIPEVELNKLFKLTPLQSNFPVNILAIVEDRPQELDL
KKILIQYINHQMTILIRKSKFNLERSKKRKHILEGIRIAIEDIDEIIKIIRSSKNTESAI
NSLISKFKLDDIQSKAILDMKLQRLTGLEQRNLLDEVRDLENKIENYEDIIISPERRNKE
LVNMINSMIDIFGDERRTEISSSTLSEIFEEDLIPNENILITMSERGYVKRLSIKEYRQQ
HRGGKGSKGASISEDDEIKSMIFTNTHTDLLLFSSYGKVYRLKAYQIPIRTKISKGIPLI
NLISIEKEEKILSLLEIDNYEDSSLVFVTRKGIIKKTNLKEYKLVRKTGKIAIKLKKEDE
LFIVKKIPNNKSLDIVIGNSNGQAVRFDLSSIRALGRSASGVRAMNIGSGKIVGCSWSDV
ENDIDNNILSISELGFGKITNISYYRKTKRGAKGVKTINILKAGKLVALKSLSGDEDLMI
IKNNGKVIRVDVSKIKKASRNTKGIKIVELDKDEKIMAVTTVPNQENIEKTIEFKIKEKP
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaatatacaaatccacaagaaaagattgatagtaattataataaaaatata
aaagaaatttctatttcagatgaaatggaaaagtcattcatagattattctatgtcagta
attgtttctcgtgcaatacctgatgtaagagatggattaaaaccagttcacagaagaatt
ctttatgcaatggatggtttagatatgcaatatactaaagcattcaaaaaatctgcaaga
gctgtaggagaagttatcgctaaataccatcctcatggtgatacttctgtttatgatgct
cttgttagacttgcgcaacctttttcaatgcgttatccattaattaggggtcaaggtaat
tttggttcagttgatggtgattctgctgctgcaatgcgttatactgaagcaaaactcgaa
aagatatcttcctttcttttagaagatatctttaaaaatacagtagactttcaagataat
tatgataattctgaaagagaaccaaaagtacttcctggaaagattccaaatttacttata
aatggttctacaggtattgctgtgggaatggcaacatctattccgccacacaatataacc
gaagtattagaagcaacaaaagctgtaattgaaaatcctcaaatttctattgaagaatta
tttgatgaatatttaaaggcacccgattttcctacaggtggaataattgtaaatcctgat
gaattattgaagatttataaaaccggaagaggaagagttattgtaagatccaaagtaaga
attgaagaagatgaaaatggaaaaggatcaaaaataataattactgaaattccttatatg
attaataaatcaaaattaattttaaaaattgctgaacttgtgaaaaataaagtaattgat
tctatttcagatttaagagatgagtcaaatagagatggaataagagttgttgtttcaata
aaaggtaatcatattccagaagttgagcttaataaattatttaaattaacaccattacaa
agtaattttcctgtaaatattttggcaattgttgaagacagaccacaagaattagattta
aaaaaaatattaatacaatatataaatcatcaaatgactatccttattagaaaatctaaa
tttaatttagaaagatctaaaaaaagaaaacatattttagaaggaattagaattgcaata
gaggatattgatgaaataataaaaattattagaagttcaaaaaatactgaatcagcaatt
aattcattaatttcaaaatttaaattagatgatattcaatctaaagcaattttagatatg
aagcttcaacgtttaacaggacttgagcaaagaaatttattagatgaagttagagattta
gaaaataaaatagagaattatgaagatattattatttctccagaaagaagaaataaagaa
ttagtaaatatgataaatagtatgattgatatttttggtgatgaaagacgcacagaaata
tcttcatcaacattaagtgaaatttttgaagaagatttaattcctaatgaaaatatatta
attacaatgtctgaaagaggttatgtaaaaagattatctataaaagaatatagacaacag
catagaggcggtaaaggctctaaaggagcttcgatttctgaagatgatgaaattaaatca
atgatttttacaaatacacatactgatttattgctattttcatcttatggaaaagtctat
agattaaaagcttatcaaattcctataagaacaaaaatatcaaaaggaattcctttaata
aatttaataagtattgaaaaagaggaaaaaattctttcattattagaaattgataattat
gaagattcatctttagtttttgtaactagaaaaggaataataaaaaaaactaatttaaaa
gaatataaattagtaagaaaaacaggaaaaattgcaataaaacttaaaaaagaagatgag
ttatttatagtaaaaaaaatccctaataataaatctctagatattgttattggtaattct
aatggtcaagctgtgagatttgatttaagttcaataagagcattaggaagaagtgcttct
ggagtaagagctatgaatattggaagtggcaaaatagtaggttgctcatggtctgatgta
gaaaatgatattgataataatattctttctatttcagaactaggatttgggaaaataaca
aatatttcttattatagaaaaacaaagcgtggtgcaaaaggtgtaaaaaccataaatata
ttaaaagcagggaaactagttgcattaaaatctctttcgggagatgaagatttaatgatt
ataaaaaataatggaaaagtaataagagtggatgtttctaaaattaaaaaagcttcaaga
aatacaaaaggcattaaaatagttgaacttgacaaagatgaaaaaataatggcagtaaca
acagttcctaatcaagaaaatattgaaaaaactatagaatttaaaataaaagaaaaaccc
tag
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