Candidatus Hepatoplasma vulgare: HPAVJP_4760
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Entry
HPAVJP_4760 CDS
T09842
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hvu
Candidatus Hepatoplasma vulgare
Brite
KEGG Orthology (KO) [BR:
hvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hvu03016
]
HPAVJP_4760 (truB)
Enzymes [BR:
hvu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HPAVJP_4760 (truB)
Transfer RNA biogenesis [BR:
hvu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPAVJP_4760 (truB)
Prokaryotic type
HPAVJP_4760 (truB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
PseudoU_synth_2
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BDV02587
LinkDB
All DBs
Position
complement(554472..555302)
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AA seq
276 aa
AA seq
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MAFYILNKEKGITSNDLVIKLKKKLNIKSIGHSGTLDPFAEGIIILATEGEKKLLSRFLE
ERKTYSGKIYFGKTTDTLDPTGKITEEKEIKDLDENILKEIIEKDFLGKIIQTPPIYSAK
KINGKKAYEYARESKEISLKEGEKEIYSFSIKKESNNTFSFLIEVSSGTYIRKIAYDLGQ
KLNIPSMLLELKREKIGNVSLENAQNIEENLKAYSSNELLNFRILNVSKEMIKKVLEGKE
VDIPLTEKEIIVKNENIEVLLKKVKKDIYKLEKRLK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggctttctatattttaaataaggaaaaaggaattacttcaaatgatttagtaattaaa
ttaaaaaagaaattaaatattaaaagtattggtcactctggtactttagatcctttcgca
gagggaataattattcttgctacagaaggagaaaaaaaacttctatctaggtttttagaa
gaaagaaaaacttattcaggaaaaatatattttggaaaaactacagatacattagatcca
accgggaaaataacagaagaaaaagaaataaaagatttggatgaaaatattttaaaagaa
attatagaaaaagattttttaggaaaaataatacaaactcctcctatttattcagcaaaa
aaaataaatggaaaaaaagcatatgaatatgcaagagaatcaaaggaaatttctttaaaa
gaaggtgaaaaagaaatttattctttttcaattaaaaaagaaagtaataatactttttct
tttttaatagaagtttcatcaggtacatatataagaaaaatagcttatgatttgggacaa
aaattaaatatcccttcaatgcttttagaacttaaaagagaaaaaataggaaatgtttct
ttagaaaatgctcaaaatattgaagaaaacttaaaagcatatagttcaaatgaactttta
aattttagaattttgaatgttagtaaagaaatgatcaaaaaagtattagaaggaaaagaa
gtagacattcctttgacagaaaaagaaataattgtaaaaaatgaaaatatagaagtttta
cttaaaaaagtgaaaaaggatatttataaattagaaaaaaggctaaaataa
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