Haloquadratum walsbyi DSM 16790: HQ_1047A
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Entry
HQ_1047A CDS
T00375
Symbol
endA
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hwa
Haloquadratum walsbyi DSM 16790
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hwa03016
]
HQ_1047A (endA)
Enzymes [BR:
hwa01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HQ_1047A (endA)
Transfer RNA biogenesis [BR:
hwa03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HQ_1047A (endA)
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Peptidase_S32
Motif
Other DBs
NCBI-ProteinID:
CAJ51177
UniProt:
Q18DJ0
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Position
54631..55851
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AA seq
406 aa
AA seq
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MEGTLVDGTVQVGADAKQRFHDARGYGRMRDSTIVELAPVEAAHLLARGDLETVIIDASS
CAGETVSVDDINTTPHIGASDTSGPHSADDSSTYHVGFRGFLAYTDAARQFAVYKDLRDR
GFYLSPARSSWPGVDPAVGNQIDFIVYPRGMGPHDDEVAHQIRVIGERETVSMSALGDVV
LAVVDEDGELTYFETNSNSAFHEVISHDEDNTDSKDIDLSEINDNQTIQDQSSLPADLSA
DVIHDRVVCYDATDSLYDENFYGQRLFGRNADTGPIQFSLIEAAYLAQQGVIAVDTATIV
AIGRDVEGERFDRRLRVYAALRNHDTVPKSGFKFGADFRVYRTFDGIDSLDHSTDLIRVC
QTDMKIYPRDLSLDIRLAGGVRKRMVFALTPANGDIHWLSVARLTL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagggacacttgttgatggaaccgttcaggttggtgcagacgccaaacagcgcttt
catgatgctcgaggatatgggcgcatgcgcgatagcacaatagttgaactcgcccccgtc
gaagcagcacacttgcttgcccgtggcgatcttgagacggtcatcatcgatgcatcctca
tgtgcgggtgagacagtttcggtagatgacataaataccacaccacatatcggtgcatcc
gatacgtctggaccacactcagcagatgactcatcgacatatcacgtcggatttcgaggg
ttccttgcatatacagatgcagcccgtcaatttgcggtgtataaagatctccgtgaccgc
ggattttatctctcacctgcccgctcgtcatggcctggtgttgacccagcagttggtaat
cagatcgattttattgtctatccacgtggcatgggaccacatgatgatgaagtcgcccat
caaatccgcgtcatcggtgaacgtgagactgtgtcaatgtcggcccttggtgatgttgtt
cttgcagttgttgatgaagacggcgagttaacatactttgagactaattctaactcagca
tttcatgaggtcatctctcatgacgaagataatacagattccaaagatattgatctaagt
gaaatcaatgataatcaaacaattcaagaccaatcatcgctcccagcagatctaagcgct
gacgtgattcatgatcgcgtcgtctgttatgacgccactgattcattatatgacgagaat
ttctatggacagcgattattcggtcgtaacgccgatacaggtccaattcaattttcactt
attgaagctgcataccttgcccagcagggtgtaatcgcagtcgatacagccacaattgtt
gctatcggacgtgatgttgagggtgagcggtttgaccgtcgtctccgtgtgtatgcagca
ctgagaaatcatgacactgttccgaaaagtggatttaaattcggagcggatttccgcgtt
tatagaacatttgacgggatcgactcactcgatcattcaactgatctcatccgtgtctgt
caaaccgatatgaaaatatatccacgcgatttatcgttagatatcagattggctggtggg
gtccgcaagcgaatggtttttgcgctcaccccagccaacggcgatatacactggctttcg
gtagcccgactcactttatga
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