Haloquadratum walsbyi DSM 16790: HQ_1108A
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Entry
HQ_1108A CDS
T00375
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hwa
Haloquadratum walsbyi DSM 16790
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hwa03016
]
HQ_1108A (truA)
Enzymes [BR:
hwa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HQ_1108A (truA)
Transfer RNA biogenesis [BR:
hwa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HQ_1108A (truA)
Prokaryotic type
HQ_1108A (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CAJ51238
UniProt:
Q18DQ1
LinkDB
All DBs
Position
161799..162617
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AA seq
272 aa
AA seq
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MRAFRLAYDGRPFSGFQRQPSVPTVEDALFDALDSLDVFNRDTDSKPSGYAAAGRTDAGV
SALRQTVGFECPSWCTPRALNSELPTSVRAWASADVQSGFHATHDALQRTYTYYLYGPEL
DMNRLNTAAEILSGKHDFHNFTSDDDGTTRKLSITLEFDDPFITARITADGFPRSLIRRL
MSALRGVGSESMTIETLTGLLNTVPQTGPDGIPTASPEPLILTRVTYPDATFRIDNRAIN
SLKSVFTHRYQRCLTQARVAEHIVSKSGSDQN
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcatttcggcttgcatacgatggacgtccattctctggatttcagcggcaaccg
tcggtgccaaccgttgaggatgcgctttttgatgcacttgattcacttgatgtgtttaac
cgtgatactgattcgaagccatcaggatacgcagcagcaggcagaacggatgctggtgta
tcagcactcagacaaacagtcggatttgagtgcccctcatggtgcacacctcgagcatta
aatagtgaacttcctacaagcgtccgggcatgggcaagtgctgatgttcagtctggattt
catgccactcatgatgctctccaacggacatatacatattatctgtatggaccagaactt
gatatgaatcggctcaacactgctgcagagatactttctggtaagcatgacttccacaat
ttcacatccgatgatgatggcacgacacgcaagttatcgatcacactcgagtttgatgat
cccttcattactgcacgaataactgctgatggattcccccgatcactcattcgtcgtctt
atgtctgcacttcgcggcgttggctcagagtcgatgacaattgaaacacttacaggactg
ttgaatacagtgccacaaaccggtccagatggtattccgacagcctccccggaaccactt
attttgacaagggttacatatccagatgctacttttcgaatagataatcgtgcaattaac
tctctcaagtctgtttttacacatcgatatcagcgctgtcttacccaggcacgtgttgct
gagcacattgtgtcaaaatcaggatcggatcagaactag
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