Haloquadratum walsbyi DSM 16790: HQ_1153A
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Entry
HQ_1153A CDS
T00375
Symbol
tfbA1
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hwa
Haloquadratum walsbyi DSM 16790
Pathway
hwa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HQ_1153A (tfbA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hwa03021
]
HQ_1153A (tfbA1)
Transcription machinery [BR:
hwa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HQ_1153A (tfbA1)
Prokaryotic type
Archaeal type
TFB
HQ_1153A (tfbA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Anti-TRAP
HTH_Tnp_ISL3
Zn_ribbon_RRN7
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
CAJ51283
UniProt:
Q18DU4
LinkDB
All DBs
Position
211508..212608
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AA seq
366 aa
AA seq
DB search
MSEKTTHTCENARTRVESNNESEVTTNSAHDRIRTDGGTVGQRWVRPGEKESEEESVSES
EEETTSESLVCPECSGNVVADDEHGETICDDCGLVITEDSVDRGPEWRAFDAKEKDQKSR
VGAPTTNTMHDKGLSTNIDWRDRDAYGNSLSSNQRQKMQRLRKWNERFRTRDSKERNLKQ
ALGEVDRMASALGLPENVRETASVIYRRALDEDLLPGRSIEGVSTSCVYAAARMAGVPRS
LDEIAEVSRVPKSEVARTYRYIARELSLEVKPADPEQYVPRFASELGLSDESTLRARQLL
QNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVADISEVTIRNRYHELLEAK
DAVGAT
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaaaaccacacacacttgcgagaacgcgagaacgagagtcgagtcgaataat
gaatcagaagtaacaacaaacagtgcacacgaccgcattcgaactgacggtggtactgtt
ggacaacgatgggttcgccctggcgaaaaagaatctgaagaagagtctgtgtccgagtca
gaagaggagacaacaagtgaaagtcttgtctgcccagaatgcagcggcaatgttgtcgct
gatgatgagcatggagagacaatttgtgatgactgtggtctcgtgattacggaggactct
gttgatcgtggtcctgaatggcgtgcgtttgatgcaaaagaaaaagaccagaagtcccgt
gttggcgccccaacaacaaacacaatgcatgataaggggctttcgacaaatattgactgg
cgagaccgcgatgcatatggcaattctctatcctcaaatcagcgacagaagatgcaacga
ctccgaaagtggaatgaacgattccgaactcgggattcaaaggagcgaaacctcaaacaa
gcacttggtgaggttgatcgaatggcctcagcgcttgggcttcccgaaaatgttcgtgaa
acggcttctgtgatttatcgtcgggcgctcgatgaagatctactacctggacggtcaatt
gagggcgtttcaacatcatgtgtctatgcggctgcacgaatggctggtgtgccccggtca
ctcgatgagattgcagaggtatcacgagttccaaaaagtgaggttgcacggacataccga
tacattgcccgagaactatcattagaagtaaagcctgcggatccagagcaatacgttcct
cgatttgcctctgaacttgggctttcggatgaatcaacgcttcgtgcgcgtcaactatta
cagaatgcaaaagaaaagggcgtgcactcaggaaagtccccagttggacttgctgctgcg
gcagtgtatgctgcggcgctgttaaccaatgaaaaaacaacacaagcagcagtaagtgag
gtagccgatatctctgaggtaacaatccgaaaccgatatcatgagcttcttgaggcgaaa
gacgcagttggagccacataa
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