Haloquadratum walsbyi DSM 16790: HQ_1227A
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Entry
HQ_1227A CDS
T00375
Symbol
tfbA2
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hwa
Haloquadratum walsbyi DSM 16790
Pathway
hwa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HQ_1227A (tfbA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hwa03021
]
HQ_1227A (tfbA2)
Transcription machinery [BR:
hwa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HQ_1227A (tfbA2)
Prokaryotic type
Archaeal type
TFB
HQ_1227A (tfbA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
CAJ51356
UniProt:
Q18KT7
LinkDB
All DBs
Position
complement(316777..317766)
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AA seq
329 aa
AA seq
DB search
MTRSTRQRERDSERTRWQGEREEDTNTDEAVDDIDLDNVDDKDLVRTGDGEIIHEPTGIV
VEEEQIDRGPEWRAFNHSERQSKSRVGAPTTKTMHDKGLTTTIDWKDKDAYGRSLSSEKR
SQMHRLRKWQERIRTKDAGERNLQFALSEVDRMASALGVPRSVREVASVIYRRALSEDLI
RGRSIEGVSTSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMRPVDP
KKYVPRFCSELDLSKEVQSKADEIIETTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQ
REVADVAQVTEVTIRNRYQEQIEAMGIPT
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacacggtccacccgccagcgggaacgagatagtgaacgaacgcgatggcagggcgaa
cgggaagaggatactaatacggatgaggctgttgacgatattgatcttgacaatgtcgac
gacaaagacctcgttcgtacaggggatggggagattatacacgagccaacaggtatcgtc
gttgaggaagagcaaatcgatagaggtcctgagtggcgggcgtttaaccactctgagcgg
caatcaaagtcccgcgtcggtgcaccgacgacaaaaacgatgcacgataaggggctgaca
acaacaatcgattggaaagacaaggatgcctatgggcgatcactctcatctgagaagcgc
tcacagatgcaccggttgcgcaagtggcaggaacgaattcgaacaaaagatgccggcgag
cggaatcttcagtttgcactttcagaggttgatcgtatggcatcagcacttggtgttcca
cggtcagttcgtgaggttgcatccgttatttaccgacgagcgctcagtgaggatctaatc
cgagggcgatcaattgagggtgtttccacctctgcattgtatgccgcctgtcgaaaagaa
gggattcctcggtcacttgaggagatctcagaggtatcgcgtgttgaacgaaaagagatt
ggacgaacatatcgatatatctctcaggaacttggtctggaaatgagaccagttgatcca
aagaaatatgttccacggttttgctcagaacttgacctctcgaaagaagttcaatcaaaa
gcagatgaaattattgagacaacggctgaacagggtcttctctcggggaaatcaccgaca
ggatacgctgctgctgctatctatgctgcgtcattactctgtaatgagaaaaaaacacaa
cgggaagttgctgatgttgcgcaagtgactgaggtgacgattcggaatcgatatcaagaa
cagattgaggcgatggggattccaacctga
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