Haloquadratum walsbyi DSM 16790: HQ_1689A
Help
Entry
HQ_1689A CDS
T00375
Symbol
tfbA4
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hwa
Haloquadratum walsbyi DSM 16790
Pathway
hwa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HQ_1689A (tfbA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hwa03021
]
HQ_1689A (tfbA4)
Transcription machinery [BR:
hwa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HQ_1689A (tfbA4)
Prokaryotic type
Archaeal type
TFB
HQ_1689A (tfbA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Zn_ribbon_PaaD
Ribosomal_S27e
Trm112p
DUF5817
Cyclin_C
Sigma70_r4
HTH_Tnp_ISL3
Zn_ribbon_IS1595
Zn_ribbon_5
Auto_anti-p27
DUF7573
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
CAJ51817
UniProt:
Q18JI9
LinkDB
All DBs
Position
832265..833305
Genome browser
AA seq
346 aa
AA seq
DB search
MTNNSHQSPAITRARARRSDERTETAQQDADTTVSDETTRSAESTETVRCPECESTQLIT
DDERGETVCADCGLVVDEDSIDRGPEWRAFDSAERDQKSRVGAPTTNLMHDKGLSTNIGW
QDKDAYGNSLSSTQRQKMQRLRTWNERFRTRDSKERNLKQALGEVDRMASALGLPENVRE
TASVIYRRALDEELLPGRSIEGVATASLYAAARQAGTPRSLDEITNVSRVGRDEIARTYR
YVVRELKLQIKPADPEQYVPRFASDLDLSDEAERRARQLLRSAKEQGVHSGKSPVGLAAA
AVYAASLLINEKVTQKEVSSVANISEVTIRNRYHELLEAEEQLSTA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgactaacaatagtcaccaatcccctgctatcacgcgcgcacgcgcgaggaggtcagac
gaacgcacggagactgctcaacaagatgcggatacaactgtgtctgatgagacgacacgg
tctgcagaatctacagagacagtccgctgtccagaatgtgagtcgactcaacttatcaca
gatgatgaacgtggtgagacagtctgtgcagactgtggacttgttgttgatgaagattca
attgatcgtggaccagagtggcgtgctttcgatagtgctgagcgtgatcaaaagtctcgt
gttggcgccccaacgacaaatctgatgcatgataaaggcttgtcaacaaacattggctgg
caagacaaagacgcatacggaaactctttgtcatcgactcagcgacaaaagatgcagcgg
cttcgaacatggaatgagcgattccgcactcgggattcaaaggaacgaaatctcaagcag
gcacttggtgaggtcgatcgaatggcatcagcgcttgggcttcctgaaaatgttcgtgaa
acggcttctgtgatttatcgtcgtgcgcttgatgaagaactactgcctggtcgatcaatt
gagggtgttgcgactgcatcgttgtatgctgctgctcgacaagctgggacgccgcgatca
cttgatgaaattacaaatgtctcacgagtgggtcgcgacgaaattgcgcgcacatatcgg
tatgtcgtgcgtgaactcaaactccaaatcaagccggctgatccagagcagtatgtgccg
cgatttgcctcggatcttgacctctcagatgaagctgaacggcgtgctcgtcaacttctt
cgtagtgcaaaagagcaaggtgtccattcagggaaatccccggttggtcttgcagcagcg
gctgtgtatgctgcatcattactcatcaatgaaaaagtaacacaaaaagaggtcagcagt
gtcgcaaatatctctgaggtaacaattcggaatcgatatcacgagctgcttgaagcggaa
gaacaactttctaccgcgtaa
DBGET
integrated database retrieval system
