Haloquadratum walsbyi DSM 16790: HQ_1701A
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Entry
HQ_1701A CDS
T00375
Symbol
rad50
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hwa
Haloquadratum walsbyi DSM 16790
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hwa03400
]
HQ_1701A (rad50)
DNA repair and recombination proteins [BR:
hwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HQ_1701A (rad50)
Archaeal homologous recombinant proteins
HQ_1701A (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_27
AAA_13
AAA_15
AAA_29
SHE3
Crescentin
DUF5790
ABC_tran
DUF4988
AAA_16
CENP-F_leu_zip
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
CAJ51829
UniProt:
Q18JH7
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Position
846647..849343
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AA seq
898 aa
AA seq
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MRFDHITLEHFKPYADASLDLQDGVTIIHGLNGSGKSSLLEACFFALYGARALDETLDDI
VTTDEDDATIELTFSHAGSQYHIKRRLRRSGDRIQTAQCTLDGPDIEIDGATDVRAFITD
ILRMDAEAFVNCAYVRQGEVNKLINATPTQRQAIIDDLLQLGRLEMYRERASDARLGVED
ILSEQRGAQTEIKAQIERKEDANLHEKLNEYEAARADIDAEIERYEENKIRAQETRDNAK
EILTSHEETQEELTELEAEIDDLRMTIEEDESTRADFREAIETKTEQVETLLSARTDALS
SAEVTSADADTLAARRSTLDDKESSIRDSLQTARQQQTMFENQAERLTERVDELESRADE
LQEQASEAETAVTKAKEQITTQQNAQADIEEQMTSVREQFNNSPATLGKATEYLEMLQEE
HDDIRNDLASTRASLSTVQDRRNEAQTLQEAGKCPTCEQPIEESPHVEAIDEYDVQIETL
TERLSQLETKQNKVNNKIESAESLVESERQFETLKERKSLASERIADARETVNEQTETAA
SLHENAGELETEADEKRDAAATQMSNADSEAEKVATLESKLETINNARDQLDNLAEIQSE
IENIRAEIERLRERREEIADRNDERREYLQAKRDRHAELAADVNEARIEKAQNNHEEAVS
YLEDVSEKLDELRDKRDNIQSQIGSVRGEIENLAELREKHTAINDRVSALETLHEQVETL
SSTYRELRADLRKQNVETLERMLNEVFMLIYDNDAYSRIQLDDAYELTIFQKDETALNPE
QLSGGERALFNLSLRCAIYRLLAEGIDGTAPMPPLILDEPTVFLDSGHVGRLVDLIKDMQ
RRGVAQILIVSHDKELIAAADHLVTVKKDPTSNRSSITRIDDPQRAAISAASSNKTPQ
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttgatcatattaccctcgagcattttaagccgtacgcagacgcgagtttagat
ctccaagacggtgtgacaatcatccatggactaaatggcagcgggaagtcgtcattactc
gaggcctgtttttttgcactttatggtgcacgggcacttgatgaaacgcttgatgacatt
gtcacaactgatgaagatgatgcaacgattgaactcactttttcacatgctggatcacaa
tatcatatcaagcggcgactccggcgaagtggcgatcgaatacagacagctcaatgtaca
cttgatggtccggatatagaaattgatggagcgaccgacgtcagagcatttattaccgat
attcttcggatggacgctgaagcctttgttaactgtgcgtatgtgcgccaaggggaggta
aataaacttattaatgcaactccgacgcagcgacaggcaatcattgacgatcttcttcaa
cttggtcgacttgagatgtatcgtgagcgtgcgtccgatgcccgacttggcgttgaggat
attctttctgagcaacgtggtgctcaaaccgagattaaagcacaaatcgagcgaaaagag
gacgccaatttgcatgaaaagctcaatgaatatgaggctgcccgagcagatatcgatgca
gaaattgaacgatatgaggagaataaaatacgggctcaagaaacccgagataacgccaaa
gagattctaacgtcacatgaagaaacacaagaggaactcacagaactagaagccgaaatc
gacgatcttcgcatgaccatcgaagaagatgagtcgacccgcgcagactttcgtgaagca
attgaaacaaagactgaacaggtggagacactcttgtcagcgcgtactgatgcactctca
tctgctgaggttacatcggctgatgcagacacgctcgcagcacgtcggtctactcttgat
gataaggagtcctcaattcgtgactcattgcagacagcacgacagcagcaaacaatgttt
gaaaaccaagctgagaggctaactgagcgggttgatgaacttgaatcgcgcgctgatgag
ctccaagaacaggcttcagaagcagaaaccgcggtcacgaaggcgaaagaacaaattaca
actcaacaaaacgctcaagcggacatcgaagagcaaatgacgtcggtgcgtgagcagttc
aataattcgccggcaactctaggtaaagcgacagagtatcttgaaatgcttcaagaagag
catgatgacatccgcaatgatcttgcgtctactcgtgcatcactttcgaccgtccaagac
cgccgtaatgaagcacagacgcttcaagaagctggtaagtgcccaacatgtgaacagcca
attgaggaatcaccacatgttgaggcaattgacgagtatgacgtgcagattgaaacgctt
actgagcgtctcagtcaacttgaaacaaaacaaaataaagtaaataataaaattgaatcc
gctgagtccctcgttgaatctgaacgacagtttgagactctcaaagaacgaaaatctctc
gcaagtgaacggattgcagacgcgcgtgaaacggtcaatgagcagaccgagacagcagca
tcactccacgagaatgcaggtgagcttgagacagaagcggatgaaaaacgggatgcggca
gcaacacagatgtcaaatgctgattcagaagctgaaaaagtggctacattggaatcaaag
ctagagacaatcaataatgctcgcgatcaattggataatcttgcggaaattcaatcagaa
attgagaacataagagcagagatcgagcgcctccgtgagcgacgtgaggaaatcgcagat
cgaaatgatgagcgccgtgaatatctccaagcgaagcgtgaccgtcatgcagaactcgct
gcggatgtcaacgaggcacgaattgaaaaagcacagaacaatcatgaagaagcggtctca
tatcttgaggatgtttctgagaaacttgatgaattacgcgacaagcgtgacaatatccaa
agtcaaattggaagtgtccgtggagaaattgaaaatttggctgagcttcgggaaaaacat
acagcaattaatgatcgcgttagtgcgcttgagacgcttcatgagcaagttgaaaccctt
tcatcaacatatcgagaactgagagccgacctccgtaagcaaaatgttgaaacgcttgag
cggatgctaaatgaggtatttatgcttatatacgataatgacgcttattctcgaatccaa
cttgatgatgcatatgagttgactatcttccagaaggatgaaactgctctcaatccagag
caactctctggtggtgaacgtgcactatttaatctttcattacgttgtgcaatctatcga
ctattagcagagggcatcgacggaacagcaccgatgccaccacttatattagacgagccg
actgtatttcttgattccggacatgttggtcgacttgtcgaccttatcaaggatatgcag
cgtcgtggcgtcgcacagattctgattgtgagtcatgataaagaactcattgcggcggca
gatcatcttgtgacagttaaaaaagacccaacaagcaatcgatcatcaatcacgcggatt
gacgacccacagcgggcggcgatcagcgctgcaagctcaaataaaacaccgcaataa
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