Haloquadratum walsbyi DSM 16790: HQ_1739A
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Entry
HQ_1739A CDS
T00375
Symbol
boa
Name
(GenBank) sensor/bat box HTH-10 family transcription regulator
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hwa
Haloquadratum walsbyi DSM 16790
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hwa03000
]
HQ_1739A (boa)
Transcription factors [BR:
hwa03000
]
Prokaryotic type
Helix-turn-helix
Other families
HQ_1739A (boa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_9
BAT
PAS_3
PAS
PAS_4
PAS_8
HTH_10
GAF_2
GAF
DUF2544
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
CAJ51867
UniProt:
Q18JE2
LinkDB
All DBs
Position
902058..907475
Genome browser
AA seq
1805 aa
AA seq
DB search
MESSLQSLRLATVASDHVITALQNSIDVLKQSIEIIPTSIDERQYDVPSDDFSPDTVSDS
KDDDMGTDTEIDPLISLTEALSQTSNSDSNDDTSLQTDSATTFDCLLIDRGLLCAEEYET
VIQSQREQYPNLPIVAFGDDSSTKSITAALDAGATTFFPQELCLNRPEHVVARILNIATD
TSTHTTPPDSPYSSSTVETANVSFTPSSPQSVQSAAHNELHTEEMHAGTQSVSTPDTESA
EIAALGFEHLCTPAAIIDVTTGDIATLNRAFAELLTHNSNIQDTAASRESSIDISKYSGR
AIRSVWDRSSADDFNSLTETLTSVAESKTQETGDLALTPVSDNDKTRWISATFCPIQSSN
QFIVLTGEDITEIRQQYSDTGHVVEIFDQPTTTHDPETGAVRNVNKSFADMFGYDAEIGG
DESLISNLAASSTDVQTSVSSDTDSDGFSSVTQTSQDHSDIQSAIIQAGNEWNPSYHEWQ
VETADGTTRWLSTNIWPGRDNDGRCVYTVSRDITARKRQETELDKIKRRFQLVTENVDEI
IYVVDADFSEIKYINDAYEDIWGRSVDALYEDTTAFIDGIDPRDRETFRADFEEMRKEIR
AGNPADSYEFEFRVCHPDGDIRWILATGYPVITDIGPNQYVGLAEDITERRQLEESYQTL
FESVSDGLVLHEPQRGDILDVNQQFCSMYDCDRDELENKSLNTVLPDDPEFRYDRALKRI
KQLDIGESQLFEWRGQRSNGEVFPIEVHLRAIEIKGNRRILASVRDITDRKEREEQIRES
ERTYREIFNKVSAGISIHDPETKDIVEVNDTMCSALGYDRQTLINTDEWVTSSDDSYTAE
RGAEIIDRVMNSGSPEEYEWVLEDANGNERVMLVKGSPAMINGESRFLSTSQEITERKHR
ETLVKNLQCAIDDIQDADSQAAIHDVVVETVREALELPLTTCWVHPASELDSAIDDSVAE
DALIYASGDSPEITIGVEGENERNLTSENPSKSTNSVNTELTPDRAHKSEAQLLDSESPE
YGIFTEGDATTYSPVNHRSGNPLTTAVAIPIGDHGLLIAGERDREEYESYLVDAAQVLAG
HAATALNRVERAAQVREHERRLQAIIDRIDEAIFLSTPQSLISDNSERGIISSGYADIWG
RSLSELHEVHEEGFFGTLHPDDYRSHRRWVTQIVEEMEAGDYADRYSREYRILRPDGSVR
WIHSDYYPTEWDDNTLRVVVVGRDITARREQQERIESFHDATAKLTTADSVNDAGQIAVE
AAASALEIPATAVYHYNDDTGALDPIATGPAVPVQTADSLQSLTPAESPAWETFVDETIQ
HIEPETGSCLNVGTFETAVILPLGRNGVLVVWQSTDIDLDIASILAATLEAALNRLRGEQ
RLESQQAALTKQTERASRLESIAKLTQRVEAAITTQSSRADTHEAVCDELVDVEPFNGAW
VSTAPVGTNQLTVQTTAGIDTDTVERYLYAEEELSDADSSDSNAQNSLIAESHPTVEAWQ
TNSYVAISGLVETGRQQAWRRVLLREGIGAICAVPISYEGITYGVLTVVATGADAFNDRT
VDVLSQLGTSVGYAITALERQRALESDETIELEFRGHKMDVPFARVATQTDGRVRHDRTV
RRQDGSVSVYYTLFNDTPSTLIQTAENTLPGDIDIVAKRESAIVIERKGSSWFGSLISEC
GGILRQCRANGSETTLIIELPQEANTRTIVERMIEAFPRLELTAQRQHHETNSTPEEIRG
QLEQQLTDRQLEAIETAHTMGYFDWPRESSGEEVAATLGITQPTVNKHIRLGEHGIFELL
FGNLS
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaagtcttcagtcgctacgtcttgcgactgtagcaagtgatcacgttataacc
gctctgcagaattcgattgacgtactcaaacaatcaattgagatcatcccgacttcgatt
gatgagcgacaatatgacgttccatcagacgatttctctcccgatacagtcagcgacagc
aaagacgatgatatgggaacagacactgagatagatcctctcatatcactcacagaggcg
ttgtctcagacctcaaactcagattcgaatgatgatacgtcgcttcagactgattcagca
accacttttgattgtttactcattgatcgtgggttattgtgtgctgaggagtatgagaca
gtcattcagtcccaacgggagcaataccctaatcttccaatcgttgcttttggtgatgat
tcatcaactaagagtatcacagcagcccttgatgcaggtgcaacgacgttcttccctcag
gagctatgtctcaatcgtccagaacacgtcgtcgcacgtatattgaatattgccactgat
acgtcgacacatacgacacctcccgactctccttactcgtcaagcacagttgaaacagcg
aacgtatcatttacaccttcctcaccacagtctgttcagagcgctgcccataatgaactg
catactgaggagatgcatgccgggacacagtcagtatcgactcctgatacagaatccgca
gagatagcagctcttgggtttgagcatctttgcacgcccgctgctatcattgatgtgaca
accggtgatattgctacactcaaccgtgcgttcgctgagttgcttactcataatagcaat
attcaggatactgctgcctccagagaaagttcaatcgacatatcgaaatattctggtcgt
gctatccggtcggtatgggacagatcaagtgctgatgattttaattcgcttacagaaaca
ctcaccagtgtcgccgagtcgaaaacacaggagactggtgaccttgcgttaaccccagta
agtgataatgataagacacgatggatttctgcgacgttctgcccgattcagtcctccaat
cagttcatcgtgctaactggagaggacatcactgaaataagacaacaatattctgacacc
ggacatgtcgttgaaatctttgatcaaccaaccacaacacacgacccagaaacgggtgct
gttcggaatgtcaataaatcatttgctgacatgtttgggtatgacgctgagataggtggt
gatgaatcactcatttcaaaccttgccgcgtcatcaacagacgtgcaaacttctgtcagt
agtgatactgactcagatggattcagtagtgtcacccagacgtcacaggaccactctgat
attcaatccgctattattcaggctggcaatgaatggaacccaagttatcatgagtggcaa
gtcgaaaccgcagatggaacaacgcgatggctctcaacaaatatctggcctggtcgagat
aatgatggacggtgtgtctatacagtctcacgagatatcaccgctcgaaagcgccaggag
actgagcttgataaaataaagcgacgattccagttagtgactgagaatgtcgatgaaatt
atctatgtagtcgatgcagacttctcagaaattaagtacataaatgatgcatacgaagat
atctggggtcgcagtgttgatgccctctatgaggatacaactgcattcattgatggaatt
gatcctcgcgatcgtgagacttttcgagcagatttcgaggagatgcgaaaagaaatccgt
gcaggtaatcctgcagatagttatgaatttgaatttcgcgtttgtcacccagatggagat
atcagatggattcttgcgactggttaccctgtcataactgatattggtccaaatcaatat
gttggtcttgctgaggatataactgaacgacggcagctcgaagaatcatatcagacgtta
tttgaaagcgtttcagatggacttgtcttacatgaaccacagcgaggcgacattcttgat
gtcaatcagcagttttgttcaatgtatgactgtgaccgagatgaactcgaaaataagtca
ctcaatactgtccttccagatgatcccgagttcaggtatgatcgagcactaaaacgaatt
aagcaacttgatattggtgagtcacagctatttgagtggcgcggacagcggtcaaatgga
gaggttttccccattgaggtacatctaagggcaattgaaatcaaaggtaatcggcgaatc
cttgcaagcgtccgagacatcactgatcgaaaagaacgcgaggagcagattcgtgagagt
gagcgaacgtatcgcgagatattcaacaaagtaagcgcagggattagtatccatgatcca
gaaacaaaagatatagtcgaagtcaacgatacaatgtgctcagcgctgggatatgatcgc
caaacactcattaatactgatgagtgggtaacttccagtgatgattcatatacagccgag
cgaggggctgagattatcgaccgagtcatgaactctgggtcccctgaagaatatgagtgg
gtgttagaggatgctaacggcaatgagcgagtgatgcttgtcaagggatccccagcaatg
atcaacggtgaatcccgatttctctcaacgtctcaagagataacagagcggaaacatcga
gaaacattggtgaaaaatctccagtgtgctatcgatgatattcaagatgctgactcacag
gctgcgattcatgatgttgttgttgagactgttcgtgaggctcttgagcttccattgacc
acatgctgggttcatccagcctccgaactggactcagcaatagatgactcagtcgctgag
gatgcgttgatatatgcaagtggtgactcccctgaaatcactatcggtgttgagggtgag
aatgaacgcaatctcacctctgagaatccgagtaaatcaaccaatagtgtcaataccgaa
ttgacacctgacagagcacataaatcggaagcgcaactacttgactcagagtcacctgaa
tatggcatcttcactgagggtgacgcaacgacatactcaccggttaatcatcgctccggg
aatccactcaccactgctgttgctattccaatcggcgatcatggactactgattgcaggt
gaacgtgaccgtgaggaatatgagtcataccttgtcgacgctgcacaagtattagctggg
catgcagcaacggctcttaatcgtgttgagcgagccgcacaagttcgtgagcatgagaga
cgactgcaagctatcattgatcgaattgatgaagcaatcttcttatcgacaccacaaagt
cttataagtgataactcagaacgggggataatcagctcagggtatgctgacatctgggga
cgctcactttcagagctacatgaagtgcatgaagagggcttctttggaacacttcatcca
gacgattatcgatcacatcgtcgctgggtaacacaaattgttgaggaaatggaggctggc
gactatgctgaccgctacagtcgtgagtaccgcatactccgtcctgatggatcagttcgt
tggatacactcagattattatccaacggagtgggatgataatacattacgtgtcgtcgtc
gtcggtcgggatattaccgcccgacgggaacagcaagagcgaatcgagtctttccatgat
gcaacagcgaaactaacaactgcagatagtgtcaatgatgcaggtcagatcgccgttgag
gctgctgcatcggcacttgagatacccgcaacggctgtttatcattataatgatgacaca
ggcgcacttgacccaatagccaccggtcctgctgttcccgttcagacggctgattctctc
caatctctcacacctgctgagtcgcctgcttgggaaacatttgttgatgagacgattcaa
catatcgaacccgagacaggttcgtgtctcaacgtgggcacatttgagacggctgtgatt
cttccacttggacgcaatggtgttcttgttgtctggcagtcaacagatattgatcttgat
atagcaagtattcttgcagcgacactcgaagcagcactcaatagacttcgtggtgaacag
cgacttgaatcacaacaggcagcattgaccaaacaaaccgagcgagccagtcgactcgag
tcaatagctaagttgacacagcgtgtcgaggcagcaattaccacacaatcatcacgagca
gacacccatgaggcggtttgtgacgaacttgttgacgttgaaccattcaatggtgcttgg
gtttcgacagcaccagtcggaaccaatcagctcactgtccagacaacagcagggatcgat
accgacacagttgaacgatatttatatgctgaagaggagctatcagacgctgatagcagc
gatagtaatgctcaaaatagcctcatagctgagagtcatccaacggtcgaggcatggcag
acaaactcatatgtagcaatcagtgggcttgttgagaccggtcgacaacaagcctggcgg
cgagttcttcttcgagagggtatcggtgcaatctgcgcagtcccaatttcgtatgaaggc
attacatatggtgttcttacagtcgtagccaccggtgctgatgccttcaatgaccgaacg
gttgacgttctttcacaacttggtacctcagtggggtatgcgattaccgcacttgaacgc
cagcgcgcgcttgaatctgatgagacaattgaattagaattccgtggtcataaaatggat
gttccgtttgctcgcgttgccacacaaactgatgggcgtgttcgtcatgatcgaacagta
aggcgtcaggatggatctgtcagcgtatattatacactattcaacgatactccatcaaca
cttattcaaaccgccgaaaatacacttcctggtgacatagatatcgttgcaaaaagggag
agcgcaatcgtcatcgagcgaaaaggctcatcatggtttgggtctcttatatccgagtgc
ggtggcattcttcggcaatgccgtgctaatggatcagaaacaaccctcattattgaactt
ccacaagaagcgaatacacgaacaatcgttgagcggatgatagaagcgttccctagactt
gaactcacagcacagcgccagcatcatgagacaaattcaacaccagaagagattcgcggt
caacttgaacaacaactcacagacagacaacttgaggcaattgaaaccgctcatacaatg
ggatacttcgattggccgcgtgaaagtagcggtgaagaagtcgctgcaacacttggtatt
actcaaccaacggtgaataagcacattcgacttggagagcatggtattttcgagttgtta
ttcgggaatctgtcgtaa
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