Haloquadratum walsbyi DSM 16790: HQ_2353A
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Entry
HQ_2353A CDS
T00375
Symbol
fdfT
Name
(GenBank) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hwa
Haloquadratum walsbyi DSM 16790
Pathway
hwa00100
Steroid biosynthesis
hwa00909
Sesquiterpenoid and triterpenoid biosynthesis
hwa01100
Metabolic pathways
hwa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
HQ_2353A (fdfT)
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
HQ_2353A (fdfT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hwa01006
]
HQ_2353A (fdfT)
Enzymes [BR:
hwa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
HQ_2353A (fdfT)
Prenyltransferases [BR:
hwa01006
]
Terpene biosynthesis
Squalene/phytoene synthase
HQ_2353A (fdfT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF1414
Motif
Other DBs
NCBI-ProteinID:
CAJ52474
UniProt:
Q18HR1
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Position
complement(1596734..1597807)
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AA seq
357 aa
AA seq
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MSQQDDHPRVDQADLRWCHRSVQGVSRTFALTVDVLDEPMSSYICLGYLVCRIADTIEDA
SHISSETQAELLETYDAALDPENEIDAATFASAVEPHLPTGELDDDWTVVRNAPRVLRTF
GGLPDEVQRAIIPPARELVQGMTTFVDRYSDTGGLRIQTREELEEYCYYAAGTVGNLITN
LLTRGSVASERRQQLYETAEEFGLLLQLVNVSKDVYDDYTDEDNIYLPAEWLADEDVPQD
QLVNPEHEAGAATVVRRTASLAGSFLDDAETYLETIPLRDGNTLEAWAIPFLLAVGTLRE
LLSRPEDALSETDVKISREEVFAVVEEMSGTTDRDVLNRLRTRIAEEPYHRRPTSAD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcaggatgaccatccgagagtcgaccaggctgatttacgttggtgccatcgg
tcggtgcagggcgtttcacggacttttgcactcaccgtcgacgtccttgacgaaccgatg
tcgtcatacatctgtcttggataccttgtttgtcgaattgcagacacaatcgaggatgcc
tcacacatctcatcagaaacgcaagctgaactacttgaaacgtatgatgctgcgcttgac
ccagagaacgaaatagacgccgccacctttgcgtctgccgttgaaccgcatctcccaaca
ggtgaattagacgatgactggactgttgttcgcaatgcacctcgtgttcttcgtacgttt
gggggacttcctgacgaggttcaaagagctatcatcccacctgcaagggaacttgtccaa
ggaatgactacctttgtcgaccggtactccgacactggcggacttcgtatccaaacgcgt
gaggaacttgaagaatactgttattatgcggcaggaacagttggaaatcttatcacgaat
cttctcacacgaggtagtgtcgcctcggagcgacgacagcaactgtatgagacagcagag
gaatttggattgctactgcagttagtgaatgtctcaaaggatgtctatgacgattatacc
gatgaagataatatctatctcccagcagagtggcttgctgatgaagatgtcccacaagat
caacttgttaatcctgagcatgaagctggcgcggcgactgtagttcggcggacggcgtca
cttgctggttcgtttcttgatgacgccgaaacatatcttgaaacaatcccccttcgagac
gggaatacacttgaagcatgggctatcccatttttattggctgttggcactcttcgtgaa
cttctctcacgccctgaagatgccctttcggagacagatgtgaagatttctcgtgaagag
gtatttgcggttgttgaagaaatgtcaggaacgactgaccgtgatgtcctcaatcgactt
cgtacacgaattgctgaggagccatatcaccgacgtccaacaagcgctgactaa
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