Haloquadratum walsbyi DSM 16790: HQ_3065A
Help
Entry
HQ_3065A CDS
T00375
Symbol
ashA
Name
(GenBank) archaea-specific helicase AshA
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
hwa
Haloquadratum walsbyi DSM 16790
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hwa03019
]
HQ_3065A (ashA)
Messenger RNA biogenesis [BR:
hwa03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
HQ_3065A (ashA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAJ53166
UniProt:
Q18FT9
LinkDB
All DBs
Position
complement(2373114..2375174)
Genome browser
AA seq
686 aa
AA seq
DB search
MSRQVSRVDTLFLHERGEDFAVVVRRDGGRVFQGTLELKQTSAGPRPAKFRVKRGDSEEP
QDPSSFVDIAREASRIRISQQTSPPNRTALSELLDGYQLDALVVRTCRYCASNGRYSPIT
DETAIATDREYICPDCAKRELERELDFSTGTGRLTGAAQQRLEELLIETQDLDRITDLLS
GGLDPDLTRFDTVSATTDEVDLVETTTLDLHPKLQELLEARFDTLLPVQSLAVNNGLFDG
HDQLVVSATATGKTLIGELAGVNRVLTEGGKLLFLVPLVALANQKHEDFTERYGDLIDVT
IRVGASRIADDTNRFDPDADIIVGTYEGIDHALRTDKDLGDIGTIVIDEVHTLKEGERGH
RLDGLISRLKYYCATRANHRRGYDGAQSIYLSATVGNPETLAERLQTTLIEFEERPIPID
RHVTFADGREKVDITNKLVRREFDTKSSKGYRGQTIVFTNSRRRCHEISRKLSYSSAPYH
AGLDYNQRKRVERDFGNQDLAAVVTTAALAAGVDFPASQVVFDSLAMGIEWLSVQEFEQM
LGRAGRPDYHDEGTVYLLVEPDGAYHNSMDRTEDEVAFTLLKGEMEDVMTIYDESAAAEE
TLANVVVAGKYAKQLNERMIGEVPTKRAVGKLLEWEFIDGLTPTPLGRAVCRHFLSPQDA
FMLLDQIRNNVDPYEIIATMELEDNE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcgacaggttagtcgcgtcgacaccttatttctccacgagaggggagaagacttc
gctgtcgttgtcagacgtgatggtgggcgcgttttccagggaacacttgaattaaagcag
acgagcgctggtcctcgtccagcaaaattccgcgtcaaacgtggtgatagtgaagaaccg
caggacccgagtagcttcgttgatatcgcccgtgaagcgtctcgtatccgaatctcacag
caaacatcacctccaaaccgaactgcactttcggagttgcttgatggatatcaactcgat
gcacttgtcgtacgtacatgtcgttattgtgcatcaaatggtcgatattcgccaatcacc
gatgagactgcaattgcgaccgatcgagaatatatttgtcctgattgtgcgaagcgtgaa
cttgaacgcgaactcgatttctcgacgggcacaggtcgcctgactggagccgcacaacag
agacttgaagaacttctcatcgaaacacaggatctcgatcgaattactgatcttctttca
ggtggtctcgaccctgatctcactcgatttgataccgttagtgcaacgactgatgaggtt
gatctcgttgaaacaacgacgcttgatcttcatcctaaactccaagagcttcttgaagct
cgatttgatacacttcttccagtacagtcactcgccgtgaataatggtctatttgatggt
catgatcagcttgtggtaagtgcaactgcaactggaaaaacacttattggtgaacttgcc
ggcgtcaaccgtgttcttactgagggtgggaaactcctgtttctcgtgccactagttgct
cttgcaaatcaaaaacatgaggacttcactgagcgatatggagatttgattgatgtaaca
attcgggtcggtgcctcgcgtatcgctgatgatactaatcgattcgacccggatgcagac
attattgttggaacatatgaaggcatcgaccatgcacttcgaaccgataaagatcttggg
gatattggaacgatcgtcattgatgaggttcatacgctgaaagaaggcgaacggggtcac
cgacttgatggactcatcagccgactcaaatattactgtgcgacacgtgctaatcatcgt
cgtgggtatgatggtgcacagtcaatctatctttccgcgaccgttgggaaccctgaaacc
cttgcagaacgtcttcaaacaacattaattgaatttgaagaacgcccaattccaattgac
cgacatgtcacatttgctgacggtcgggagaaagttgatatcacgaataagcttgtccgc
cgtgagtttgatacaaaatcatcgaaagggtaccgtggacagacaatagttttcactaac
tcacgacgtcggtgtcatgaaatctcacgaaaactttcgtattcatcagcaccatatcat
gctggactagattataaccaacgaaaacgtgttgaacgagactttggcaatcaggatctt
gctgctgttgtcacgaccgcagcgctcgcggctggcgttgatttcccggcttcacaggtg
gtatttgattcgctcgcgatgggtatcgaatggctctcagtacaagaatttgaacagatg
cttggtcgcgctggtcgccccgactatcatgatgaaggaacagtatatctacttgttgag
cctgatggagcatatcacaattcgatggatcgaaccgaggatgaagtcgcgttcacacta
ttaaaaggtgagatggaagacgtaatgacgatatatgatgagtctgctgctgctgaggag
acgcttgcgaatgtcgttgttgctggtaaatatgcaaaacagctcaatgaacgaatgatt
ggtgaagtgccgacaaaacgcgctgttggaaaacttttagagtgggaatttatcgatgga
ctcactccaaccccacttggacgcgctgtctgtcgccattttctttcaccacaagacgcg
ttcatgttacttgaccaaattcgcaataatgtcgacccgtatgagattatcgcaacaatg
gaactcgaagataatgagtga
DBGET
integrated database retrieval system
