Haloquadratum walsbyi DSM 16790: HQ_3396A
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Entry
HQ_3396A CDS
T00375
Symbol
rpoB2
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
hwa
Haloquadratum walsbyi DSM 16790
Pathway
hwa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HQ_3396A (rpoB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hwa03021
]
HQ_3396A (rpoB2)
Enzymes [BR:
hwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HQ_3396A (rpoB2)
Transcription machinery [BR:
hwa03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HQ_3396A (rpoB2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Acetate_kinase
Motif
Other DBs
NCBI-ProteinID:
CAJ53493
UniProt:
Q18EX4
LinkDB
All DBs
Position
complement(2761641..2763218)
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AA seq
525 aa
AA seq
DB search
MNREDRRTVSREYFSEDRLAEHHFRSFNNFLERGMQDVVTEKERIETDIGDKEGEEPVFV
ELGDVRIETPRVREADGSEELLFPQEARLRNITYAAPVFMEMSIVRGGDEEQEVVVDNTE
TKVGRMPIMVGSTKCNIAGLTDEELIDIGEDPVDPGGYFIVNGSERVLMTSEDLAPNKIL
AEYDSKYGDEIQVAKTFSQRRGYRALVLCERNREGLLEVSFPSVSGSVEFVTLVRALGLE
SDEEIVHRVSDDPEIVKFMLENLEEASVQTEEEAIETLGKRVASGQGKNYQLKRANYVID
RYLLPHLHEDGIEEEAVRINKAYYLCRMAEACFELALDRRESDDKDHYANKRLKVSGDLM
KDLFRTALNKLARDVKYQLERANMRNRQLTVSTVVRSDVLTERLEHPIATGNWVGGRSGV
SQLVDRTDYMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
AQAMELSQNVEDEQSLKRELSSMGVDIFHTSTSTDDTDTRSPADD
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgagaagaccgccgaactgtctcacgagagtacttttcagaggatcgacttgct
gaacaccacttccgttcgttcaataactttcttgaacgaggaatgcaggatgttgtcacc
gagaaagaacgcattgagaccgatatcggtgataaagaaggagaagaaccagttttcgtc
gaacttggtgatgttcggattgaaacgcctcgcgtccgcgaggctgatgggtccgaagaa
ctgctcttcccacaagaagcacgacttcggaatattacctatgccgcaccggtcttcatg
gaaatgtcaattgtccgtggcggcgatgaagaacaagaagtcgttgttgacaataccgaa
acgaaggtcggtcggatgccgatcatggtcgggtcaacaaaatgcaacatcgctgggctg
actgatgaggaactcattgatatcggtgaagaccctgttgatccgggtggttacttcatt
gtcaatgggtctgaacgtgtattgatgacttctgaggatctcgcaccaaataagatcctt
gcagagtatgatagcaaatatggagatgaaatccaggttgcaaagacgttctcacagcgg
cgtggataccgcgcgcttgtcctatgtgagcgaaatcgcgaaggattacttgaggtctca
ttcccatccgtttccggcagcgttgagtttgtgacgcttgtccgtgcgcttgggcttgaa
tctgatgaggagattgtccatcgtgtttctgatgatcctgagattgtgaaatttatgctg
gaaaatctcgaagaggcatcagttcaaactgaggaagaggcgattgaaacacttggaaaa
cgcgttgcaagtggacaaggtaaaaactaccaattaaagcgagcgaattacgtcattgat
cgctatctcctcccacatcttcatgaagacggcattgaagaagaagctgtccgaataaac
aaagcatattatctttgccgaatggctgaggcgtgttttgaacttgcacttgaccgtcgt
gaatcagatgataaagatcactatgcgaataaacgactgaaggtttctggtgaccttatg
aaagatctattccggacagcattgaacaagcttgctcgtgacgtgaagtatcagctagag
cgagcaaacatgcgaaaccgtcagctcacggttagtacagttgttcgatcagatgttctt
actgaacggcttgaacatccgattgcaactggtaactgggttggcggacggtctggtgtt
tcacagcttgttgatcggacagattatatgggtgtgttatcacatctccgccgacttcga
agtccactttcccgaagtcaaccccactttgaggcacgtgatctacatgccacccagtgg
ggacgcatttgtccatcagaaacacctgagggaccgaactgtggactcgtgaagaacttt
gcacaagcgatggaactctcacagaatgttgaggatgagcaatcactgaaacgagagctt
tcctcaatgggcgttgatatcttccatacaagcacgagtaccgatgacacggatacgcgg
agtccagcggatgattaa
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