Haloquadratum walsbyi DSM 16790: HQ_3410A
Help
Entry
HQ_3410A CDS
T00375
Symbol
tbpB
Name
(GenBank) TATA-binding transcription initiation factor
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hwa
Haloquadratum walsbyi DSM 16790
Pathway
hwa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HQ_3410A (tbpB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hwa03000
]
HQ_3410A (tbpB)
03021 Transcription machinery [BR:
hwa03021
]
HQ_3410A (tbpB)
Transcription factors [BR:
hwa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
HQ_3410A (tbpB)
Transcription machinery [BR:
hwa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HQ_3410A (tbpB)
RNA polymerase III system
TFIIIB
HQ_3410A (tbpB)
RNA polymerase I system
SL1/TIF-1B
HQ_3410A (tbpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
T4bSS_IcmS
Motif
Other DBs
NCBI-ProteinID:
CAJ53507
UniProt:
Q18EW0
LinkDB
All DBs
Position
2776154..2776714
Genome browser
AA seq
186 aa
AA seq
DB search
MTDPKDTINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQKPKSAALIFR
SGKIVCTGAKSTTDVRESLHIVFDKLRDLRIPVSDNPDITVQNIVTSADLGEDLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDNPAVVALLFGSGKLVITGGKEPDDAREAVDVILSRLD
ELGLAG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccgaaggatacaatcaatattgaaaacgttgttgcctcgacgggaatcggg
caagaacttgatcttcagagtgtggcaatggatcttgagggggcagattatgacccagaa
cagtttccaggattagtctatcgaacacaaaagccgaagtctgctgctcttatttttcga
tctgggaagattgtctgcaccggggcaaagtcaactactgacgtccgtgaaagtctccat
attgtgtttgacaaacttcgtgacctccggattcctgtctccgacaatccagacatcacc
gtacaaaacattgtgacatctgcagatcttggagaagatttgaatcttaatgcaatcgct
attggacttggattagagaatattgaatatgagccagaacagtttcccgggcttgtatac
cgacttgataacccagctgttgtggcattattattcggatcgggaaaactcgtgattacg
ggcggaaaagagcctgatgatgcacgtgaggctgttgatgttattctctcccgattggac
gaactcggtttagctggttaa
DBGET
integrated database retrieval system
