Haloquadratum walsbyi DSM 16790: HQ_3686A
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Entry
HQ_3686A CDS
T00375
Symbol
pcn
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
hwa
Haloquadratum walsbyi DSM 16790
Pathway
hwa03030
DNA replication
hwa03410
Base excision repair
hwa03420
Nucleotide excision repair
hwa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HQ_3686A (pcn)
03410 Base excision repair
HQ_3686A (pcn)
03420 Nucleotide excision repair
HQ_3686A (pcn)
03430 Mismatch repair
HQ_3686A (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hwa03032
]
HQ_3686A (pcn)
03400 DNA repair and recombination proteins [BR:
hwa03400
]
HQ_3686A (pcn)
DNA replication proteins [BR:
hwa03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
HQ_3686A (pcn)
DNA repair and recombination proteins [BR:
hwa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
HQ_3686A (pcn)
MMR (mismatch excision repair)
Other MMR factors
HQ_3686A (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
HQ_3686A (pcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Porin_O_P
Motif
Other DBs
NCBI-ProteinID:
CAJ53773
UniProt:
Q18E60
LinkDB
All DBs
Position
3074896..3075639
Genome browser
AA seq
247 aa
AA seq
DB search
MFKAIVGASTLQDALDSVSVLVDECKIRLNEGELAIRAVDPANVGMVDLALDTAAFESYT
ADDGVIGVNLSKLEDFIGMASGDQLVELELDEETRKLNIQMDGLSSTLALIDPDSIRQEP
DIPDLDLAAEIMLEGAQLDRGIKAADMVSDHVRLRVASDTEAYHIEAEGDTDDVDFRLDT
DDLIALTAGEADSLFSLDYLKDMNKAIPKDAEVTIELGQEFPVKVHYGIAEGYGEITYML
APRIQSD
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggccatcgtgggcgcgtcgacactccaagatgcgctcgattccgtgagcgta
ctcgtcgatgagtgcaagatccgactcaacgaaggcgaactcgcgattcgggccgttgat
ccggctaatgtcgggatggttgatttggctctcgatacagcagcgttcgaatcgtataca
gccgacgacggtgtcattggtgtcaacctttcaaaacttgaggatttcattggtatggct
agcggtgaccaactggttgaactcgaacttgatgaggagacacgaaagctcaacattcag
atggatgggctctcatcgacacttgcattaattgatcccgattcaattcgacaggaacct
gatatccccgatttggaccttgctgctgagattatgcttgagggggcacaacttgatcgt
ggcatcaaagcagctgatatggtttctgatcatgttcgattacgtgttgcctctgatacc
gaagcatatcatattgaagctgaaggtgataccgatgatgttgatttcaggcttgatacg
gatgacctcattgcacttaccgctggtgaggctgattcattgttctcacttgattatctc
aaagacatgaataaagcgattccaaaagatgcagaggttacgattgaattaggacaagaa
ttccctgtgaaggttcattatggaattgctgaggggtatggtgaaatcacatatatgctc
gcgcctcgaatccagagtgattaa
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