Haloquadratum walsbyi C23: Hqrw_1003
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Entry
Hqrw_1003 CDS
T01942
Symbol
polD1
Name
(GenBank) DNA-directed DNA polymerase D exonuclease subunit DP1
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
hwc
Haloquadratum walsbyi C23
Pathway
hwc03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hqrw_1003 (polD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hwc03032
]
Hqrw_1003 (polD1)
Enzymes [BR:
hwc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hqrw_1003 (polD1)
DNA replication proteins [BR:
hwc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
Hqrw_1003 (polD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Colicin_M
Motif
Other DBs
NCBI-ProteinID:
CCC38986
UniProt:
G0LFW6
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All DBs
Position
3557..5179
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AA seq
540 aa
AA seq
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MPSELSARIVSALAQHGYNADREAVTLLAGAKYPNTALEEVLDLIADDTLRITAADVRPV
IDSTPSDLSSITEPVNKDSTRDNNAQDQSISDQKTQYLPSQSTSPNNITPDLDSSPEQTT
GASQPSQKAHTSTPETDQSVNSFDINGDITGRSTGTGSYDDFVSVFRDRYERLSSHLRSR
VNHRPTQAIGSMSGETDTAIIGLVNDIRSTKNGHWIVELEDTTGIFPCLVMKDRSFADVV
NELLFDECIAIEGTLSGDGEILFANDIHFPDIPHNHTPNTADRHVQAALISDIHVGSQEF
VYDAWERFAAWLHTDEADAIEYLLIAGDMVEGVGVYPDQDDELDIVDIYAQYETFAEHLK
SVPGDIEILLIPGNHDAVRLAEPQPGFDDELRSIMSAHDARISGNPSFVTIEGVQILMYH
GVSLDEVIAELPSPKANYDEPHKAMYQLLKKRHIAPQFGERTRLAPEDSDYLIIDEIPDV
FHTGHVHKLGWGKYHDVLAVNSGCWQAQTAFQRSVNIDPDVGYAPIIDLDTLEMTVRKFL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gtgccttcggagttatcggcgcgtatcgtttccgcacttgcacagcatggatataatgca
gatcgtgaagctgttacactccttgcgggtgctaaatatcctaatactgcactcgaagag
gtgttagatttaatcgcggatgatacgcttcggattactgctgctgatgttcgccctgtg
attgactcaacaccatcagatctttcaagcataaccgaacccgtgaacaaagactcgaca
agggataataatgcccaagatcagagtatatccgatcaaaagacacaatatctcccgtcc
caatcgacttctccgaataatataacacctgatttagattcatcaccggagcaaaccacg
ggtgcgtcacaaccatctcaaaaggctcatacatcaacaccagagacagatcaatctgta
aattcatttgatatcaatggtgacattaccggacgaagcacaggcaccggatcatacgat
gactttgtgtcggtttttcgagaccgctatgagcgtctttcatcacaccttcggagccgt
gtcaaccatcgacctacacaagctattggttcaatgtctggtgaaacggatacagcgatt
attgggttagttaatgatattcgatcgacaaaaaatggtcactggattgttgaactggaa
gatacaacaggtatatttccgtgtcttgtcatgaaagaccggtcattcgctgatgttgtt
aatgaactattgtttgatgagtgtattgcaatcgaaggcacactttcgggagatggagaa
atactctttgcgaacgatattcacttccctgacattccgcataatcataccccaaatact
gctgacaggcatgttcaagcggcgctcatttctgacatccacgtcgggagtcaagaattc
gtttatgatgcctgggagcgatttgctgcatggcttcacacagacgaggccgacgctatt
gagtatttgctgattgcgggtgatatggttgaaggtgttggagtgtatcctgatcaggat
gatgaacttgatattgttgatatttatgcgcagtatgaaacgtttgctgagcatctcaag
tctgtccctggcgatattgaaattcttctgatacccggaaatcacgacgctgtcaggctt
gctgagccacaacctggatttgatgatgaactccgttcaatcatgtcagcacatgatgca
cgtatctctggaaacccttcatttgtcaccattgagggcgttcaaatattgatgtatcac
ggcgtttctcttgatgaagttattgctgaactcccatcaccgaaggcaaattatgatgaa
cctcacaaggcgatgtatcagctattaaaaaaacgacatatcgctcctcaatttggtgag
cggacacgtctcgcccctgaagatagtgattacttaataatcgatgaaatcccagatgtg
tttcataccggtcacgtacataagcttggctggggaaaatatcatgatgtgcttgcagtg
aactctggatgttggcaggcacagacagcatttcagcggtcggtgaatattgatcctgat
gtagggtatgcgccaattatcgatctagatacgcttgaaatgactgttcgcaaattcctg
tga
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