Haloquadratum walsbyi C23: Hqrw_1296
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Entry
Hqrw_1296 CDS
T01942
Symbol
topA2
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hwc
Haloquadratum walsbyi C23
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hwc03032
]
Hqrw_1296 (topA2)
03400 DNA repair and recombination proteins [BR:
hwc03400
]
Hqrw_1296 (topA2)
Enzymes [BR:
hwc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Hqrw_1296 (topA2)
DNA replication proteins [BR:
hwc03032
]
Prokaryotic type
DNA Topoisomerases
Hqrw_1296 (topA2)
DNA repair and recombination proteins [BR:
hwc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Hqrw_1296 (topA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DNA_pol_lambd_f
DUF4332
IMS_HHH
Cdd1
HHH
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CCC39257
UniProt:
G0LHL9
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Position
328122..330695
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AA seq
857 aa
AA seq
DB search
MSQGPELIITEKDNAARRIADILSGDSATADREQGVNVYKWGGKRCIGLSGHVVAVDFPQ
EYSDWRDVEPIELIDAPIEKNPTKQNIVTTLKKLARRARRVIIATDYDREGELIGKEAYE
LVRRVNESTPIDRVRFSSITEESVTTAFENPDDLDFNLAAAGEARQVIDLVWGAALTRYL
SLSAGQLGSDFISVGRVQGPTLKLIVDREREIEAFDPEDYWELFVDLTQADKPIEVSTDD
TTAGFEAQYFYHADDGTEAERITEESTAKTVFETLESASIAHVDSVKRRTRTDEPPAPFN
TTQFISAAGSIGYAAQRAMDIAEDLYTAGYITYPRTDNTVYPDDLDPRELIEALTNGSRF
GSDARDVLDQETLSPTTGDEETTDHPPIHPTDELPKPSELDDDKWEVYELIVRHFLATVS
NPATWEHLRIVAIVDDAYSIKSNGRRLLNPGYHAVYPYSNATESLIPDIEDGETLRLIDS
RIEAKQTQPPRRYGQSRLIETMESMGIGTKSSRHNVIQKLYNRGYIESDPPRPTQLARAV
VEAAEEFAELIVSEEMTAQLETDMQAIAEGEETLESVTSASRSILTDVFKKLMNTDAEIG
DHLQRSMKADKTIGPCPQCEGDLITRKSQAGSHFIGCDSYPDCEYTLPLPSTGKPHILET
VCDVHNLQQIKMLAGKRSFVHGCPLCEAEAADEQADRVIGTCPECNTHADGELAIKRLRS
GSRLVGCTRYPDCEYSLPLPRQGEIDVTDNICDEHALPALQILEADENTTKDKTTKESDD
IWELGCPICNYREYQSDQTDSSTLESVHGIGAKTAEKLKDAGVDTVSALKSAEANTLADR
VDGVSVDRLRKWQSTAD
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggaccagaactcattatcaccgagaaagataacgccgcgcggcggattgct
gatatcctgagtggtgactcagcaacagcagaccgcgagcagggtgttaatgtgtataaa
tggggtgggaaacgctgcatcggtctttctggacatgtcgttgctgtcgatttcccacaa
gaatatagtgattggcgtgatgttgagcctatcgaacttattgatgcgccaattgaaaaa
aacccaacgaaacaaaatatcgtgacgacattgaaaaaactcgctcggcgggcacgccgt
gtgattattgcgactgattatgaccgagagggtgagttgattggaaaagaagcatatgag
cttgttcgcagagtgaatgagtcaactccaatagatcgcgttcgattttcatcaatcacc
gaagagtccgttacgacagcatttgaaaatccagacgacctcgattttaatcttgcagca
gcaggtgaggctcgacaggtaattgatctcgtatggggagctgcattgactcgatatcta
tccttgtcagcagggcaacttgggagtgatttcatctctgtcggtcgggttcaaggacca
acactgaaattgattgttgatcgcgaacgcgagattgaggcgtttgatcctgaggactac
tgggaattgtttgttgacctcacgcaagcagacaaacctattgaggtgagcacagacgat
actacagcaggatttgaagcacagtacttctatcatgcagatgatggaactgaagctgaa
cgaatcactgaggaatcaactgcaaaaacggtattcgaaacattagaatcagcttctatt
gctcacgtcgactcggtgaagcgccggacacgaaccgatgaaccgcccgcaccgttcaat
acaacacagttcatcagtgcagcaggatcaattgggtacgccgcgcagcgggcgatggat
attgcagaggacctctacacggctggatacatcacatatccacgaactgacaataccgtc
tatcccgatgaccttgatcctcgagagcttattgaagcactcacaaatggatctcgattc
ggatcagatgcacgtgatgtccttgatcaggaaacactctcaccgacgactggtgatgaa
gagacgaccgatcacccaccaatccatccaaccgatgaacttcctaagccctcagaatta
gacgatgataaatgggaagtgtatgaactcattgttaggcactttcttgctactgtctct
aatccagcaacatgggaacatctgcgtatcgttgctattgtcgatgacgcttattcaata
aaatccaacggacgacggctactgaatcctggatatcacgccgtatatccatactcaaac
gcaacggaatcacttattccggatatcgaagatggcgaaacgcttagattgattgattcg
cgaatcgaggcaaagcaaacccaaccgccgcgacggtacggccagtctcgactcatcgaa
acaatggagtcaatggggattgggacaaaatcaagtcgacacaacgtcattcagaaactt
tacaatcgaggatacatcgaaagcgacccgccacgaccgacacaactcgcacgagccgtt
gttgaggctgctgaagagtttgcagaattaatcgttagtgaggaaatgacggctcaattg
gagacagatatgcaggcaatcgcagagggtgaggaaacacttgagtcagtaacttctgcg
tcacgctcgatactcacggatgtattcaaaaaattaatgaacacagatgctgaaatcggc
gatcatcttcagcggtcgatgaaggcagataagacgattggaccatgtccacagtgtgaa
ggcgatcttattacccgaaagagtcaggctgggtcacacttcattggatgtgatagctat
cctgattgtgaatacacgctcccattaccctcgactggaaagccacacatacttgagacg
gtgtgtgacgtacacaatcttcagcagataaaaatgcttgctggaaagcgcagtttcgtc
catggctgtccgctgtgtgaggctgaagcagcggatgaacaagctgatcgtgtgattggc
acctgcccagaatgcaacacccatgctgatggtgaacttgcaatcaaacgtttgcggtct
gggtcacgacttgttgggtgcactcgatatccagactgtgagtattcattgccccttcca
cgacaaggagagattgacgttacagataatatatgtgatgaacacgcgttacctgcatta
cagatacttgaggcagacgagaacacgacaaaagacaagaccaccaaagagagtgatgat
atctgggaactcggctgtccaatctgtaactatcgggagtatcaatctgatcagaccgac
agctcaacgcttgaaagcgttcatgggattggtgcaaagacagctgaaaagctaaaagac
gctggtgttgatactgtttctgcgcttaaatcagcagaagcaaacacgcttgctgaccgt
gtcgacggtgtcagtgtggaccgactgcgaaaatggcaatcaactgcagactga
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