KEGG   Haloquadratum walsbyi C23: Hqrw_1370
Entry
Hqrw_1370         CDS       T01942                                 
Symbol
csm6
Name
(GenBank) CRISPR-associated DNA-binding protein Csm6
  KO
K07725  CRISPR-associated protein Csa3
Organism
hwc  Haloquadratum walsbyi C23
Brite
KEGG Orthology (KO) [BR:hwc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hwc03000]
    Hqrw_1370 (csm6)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hwc02048]
    Hqrw_1370 (csm6)
Transcription factors [BR:hwc03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    Hqrw_1370 (csm6)
Prokaryotic defense system [BR:hwc02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    Hqrw_1370 (csm6)
SSDB
Motif
Pfam: Csa3_N HTH_IclR HFX_2341_N HTH_34 HTH_24 HTH_5 MarR MarR_2 DUF6293_C HTH_27 Fe_dep_repress HTH_20 HTH_11 Vitellogenin_N Rrf2
Other DBs
NCBI-ProteinID: CCC39325
UniProt: G0LHT7
LinkDB
Position
complement(392895..393539)
AA seq 214 aa
MQTFISPIGFNTTSVTRSLLEHGIDSEDTVQLIRPATETNDNRATEAVEDVKRLLQEIEP
KIVVHTESIPHNDFEDAVMTCSNLLRTADGEVVVSLSGGARDVLLPLTVATMAHEAAITT
TLGYSDIDGQVREFGLPSVSTMPSKGALETLRVVADANSSVTLPELSDNLEAVKSTITRH
VSSLEDAGYVTSWIKERNKHVSITLSGRLCIAVV
NT seq 645 nt   +upstreamnt  +downstreamnt
atgcagacgttcatctcacctatcggcttcaacacgaccagcgtgactcggagcctgctt
gagcacggaattgacagcgaggatacagtgcaactgattcgtccggccactgaaactaat
gataatcgagcgactgaggctgttgaagatgtaaaaagactattgcaggaaatcgaaccg
aaaattgttgtgcatactgaatcaatacctcataatgatttcgaagacgctgtgatgacc
tgcagcaatctcctcagaacagcggatggagaagtcgttgtgagtcttagcggtggtgcg
cgagatgtgctgttaccgctgacggtagcgacgatggctcacgaagcagcgataacgacc
acgcttggatacagcgatattgatggtcaggttcgtgagttcggactaccatctgtttct
actatgccatcgaagggggctttagagacactccgagtagttgctgatgctaattcatca
gtaacattacctgaattatcagataatctggaagctgttaaaagtacaattactagacac
gttagttcactagaggatgcagggtatgtcacttcttggattaaggaacggaataaacat
gtgtcgattacattgtcaggacgactttgcattgcagtagtttga

DBGET integrated database retrieval system