Haloquadratum walsbyi C23: Hqrw_1388
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Entry
Hqrw_1388 CDS
T01942
Symbol
tbpC
Name
(GenBank) TATA-binding transcription initiation factor
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hwc
Haloquadratum walsbyi C23
Pathway
hwc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hqrw_1388 (tbpC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hwc03000
]
Hqrw_1388 (tbpC)
03021 Transcription machinery [BR:
hwc03021
]
Hqrw_1388 (tbpC)
Transcription factors [BR:
hwc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Hqrw_1388 (tbpC)
Transcription machinery [BR:
hwc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Hqrw_1388 (tbpC)
RNA polymerase III system
TFIIIB
Hqrw_1388 (tbpC)
RNA polymerase I system
SL1/TIF-1B
Hqrw_1388 (tbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
CCC39342
UniProt:
G0LHV4
LinkDB
All DBs
Position
416835..417383
Genome browser
AA seq
182 aa
AA seq
DB search
MVKVVNIVTSGSLGTELDLENVYRDVGAIGEYDPNKYPAVYFRFKEDAPLVTLYRTGKYI
VTGADSKEEAYSIRDRFLGLLAEQGMIAEQDDEWFRIQNLVCTAELGESLNLNALAIGLG
LEMTEYEPEQFPGLTYRPTGTDSVVLLFASGRVVITGSPDLDTAEETFAALQEEVTDLLA
ID
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagtcgttaatatcgtaacgtctgggtctctcggcactgaactagatctagag
aatgtatatcgcgatgttggagcaattggtgagtacgatcccaacaaatatccagcagtg
tatttcagattcaaagaagacgctcctttggttactctctatagaactgggaagtacatc
gtaaccggagcagattcaaaggaagaggcgtattcgatacgcgaccgcttcctcggtctg
cttgcagagcaggggatgattgcagagcaggatgacgagtggtttcgaattcagaacctc
gtctgtacggcagaactgggggagtcgttgaatctcaatgcactcgcaatcggtcttggt
ctcgaaatgactgaatacgagcctgagcagttccctgggttgacttatcgaccaaccggt
accgatagtgtcgttctcctcttcgcctctggccgtgtcgtgattacgggcagccctgac
ctcgatacagcagaggagacgttcgccgcgttacaagaagaagtgacagacctccttgcc
atcgactaa
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integrated database retrieval system
