Haloquadratum walsbyi C23: Hqrw_1399
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Entry
Hqrw_1399 CDS
T01942
Symbol
spt4
Name
(GenBank) transcription elongation factor Spt4
KO
K15171
transcription elongation factor SPT4
Organism
hwc
Haloquadratum walsbyi C23
Pathway
hwc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Hqrw_1399 (spt4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hwc03021
]
Hqrw_1399 (spt4)
03019 Messenger RNA biogenesis [BR:
hwc03019
]
Hqrw_1399 (spt4)
Transcription machinery [BR:
hwc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Hqrw_1399 (spt4)
RNA polymerase I system
Hqrw_1399 (spt4)
Messenger RNA biogenesis [BR:
hwc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Hqrw_1399 (spt4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
DZR
Zn_ribbon_RanBP
Zn_Ribbon_1
HypA
DUF7129
DUF7576
NRDD
Motif
Other DBs
NCBI-ProteinID:
CCC39352
UniProt:
G0LHW4
LinkDB
All DBs
Position
425388..425585
Genome browser
AA seq
65 aa
AA seq
DB search
MVQTRLSCRECHYINHADSQTCENCGSSSLTEDWAGYVVVTHPDDSAIAEEMNVKEPGGY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggtacaaacccgcctttcatgtcgcgagtgtcattatatcaatcacgccgattcacaa
acctgtgagaactgtgggtcaagtagtctgactgaggattgggcgggatatgttgttgtt
acgcacccagatgattcagcaattgctgaggagatgaatgtcaaagaacccggtggatac
gcgctaaaggtgcgctaa
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integrated database retrieval system
