Haloquadratum walsbyi C23: Hqrw_1515
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Entry
Hqrw_1515 CDS
T01942
Symbol
rpa2
Name
(GenBank) replication protein A
KO
K07466
replication factor A1
Organism
hwc
Haloquadratum walsbyi C23
Pathway
hwc03030
DNA replication
hwc03420
Nucleotide excision repair
hwc03430
Mismatch repair
hwc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hqrw_1515 (rpa2)
03420 Nucleotide excision repair
Hqrw_1515 (rpa2)
03430 Mismatch repair
Hqrw_1515 (rpa2)
03440 Homologous recombination
Hqrw_1515 (rpa2)
03460 Fanconi anemia pathway
Hqrw_1515 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hwc03000
]
Hqrw_1515 (rpa2)
03032 DNA replication proteins [BR:
hwc03032
]
Hqrw_1515 (rpa2)
03400 DNA repair and recombination proteins [BR:
hwc03400
]
Hqrw_1515 (rpa2)
Transcription factors [BR:
hwc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Hqrw_1515 (rpa2)
DNA replication proteins [BR:
hwc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Hqrw_1515 (rpa2)
DNA repair and recombination proteins [BR:
hwc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Hqrw_1515 (rpa2)
MMR (mismatch excision repair)
Hqrw_1515 (rpa2)
DSBR (double strand breaks repair)
HR (homologous recombination)
Hqrw_1515 (rpa2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
Ssb-like_OB
SHLD2_OB1
HROB
Exo84_C
RADX
DUF5666
Motif
Other DBs
NCBI-ProteinID:
CCC39461
UniProt:
G0LK35
LinkDB
All DBs
Position
532450..534006
Genome browser
AA seq
518 aa
AA seq
DB search
MSSLTDIYDELDTDVSREEFESAVEDKVEQMGGLADEETAAKLIAHELRNEEVEGVADIE
PGMDEAKFLAKVLQIGDCRTFERDGDAEDGRVINIEVADASGQIRVTMWDDMADDAINQL
EVGQVLRIGGRPKDGYDGVEIDVDTVEPAPDAEIDVDIHTVNTHRVEDLSLGLSDVNLRG
RVLSTDKIRTFDRDDGSEGRVANLSVGDPTGRIRVTLWDGSASLVDSVDPDDSIEIVDGY
VREQDGALELHVGDRGTIESIDEDVEYVPDTDPIETVVIDETADIAGGVIETDTKRTFDR
DDGSKGQVRNVRIRDDTGDIRVALWGDKADLDIDLADYVVCTDVEIQEGWQDDHEASAGW
RSAVYRLDERPEDATTTVESSSNQQQTETGKASGLDAFAETNSDETTVTASPTSQDSNIT
SSDSMRDNADHNHEQAASDGGASTIESPQTSEDDNTTDSDVESFTGTVVQAGSPVVLDNG
TDTRRVETDASLRLGEVVTVSGSTDGQTITPTEIDRSS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagttcattgactgacatttacgacgagcttgataccgatgtctcacgtgaggagttt
gaatcggctgttgaagacaaagtcgagcagatgggtgggcttgctgatgaggaaacagca
gcaaaactaatcgcacatgaacttcgtaatgaagaggttgagggggttgcggatatcgaa
ccggggatggatgaagcaaaattccttgcgaaggtactccagattggtgactgtcgcaca
ttcgagcgtgatggcgatgccgaggacggtcgtgtaatcaatatcgaggtcgcggatgcg
tctgggcaaattcgggttacaatgtgggatgacatggctgatgatgcgattaaccaactt
gaagttgggcaggtcctccgcattggtggtcgaccaaaagatggatatgacggtgtcgaa
attgatgttgatactgtcgaacctgcgcctgatgctgagattgatgtcgatatccatact
gtgaatacacaccgtgttgaggacctttcattaggactttcagatgtaaatctccgcggt
cgtgtcctcagcaccgataaaattcgaacatttgaccgtgatgatggctctgagggtcgc
gttgctaacctcagtgttggtgacccaactggtcgtatccgggtcactctttgggacggc
agcgcgagtctcgtcgattcagtcgatccagatgacagtattgagattgttgatggatat
gtccgtgaacaagatggggcacttgaactccatgtcggtgaccgtggtacgattgaatca
attgatgaggatgtcgaatacgtcccagatacagatccaattgagacagttgtgattgat
gagacggctgatatcgccggtggcgtgattgaaacggacacaaagcgtacgtttgaccgt
gatgacggttcaaaaggacaagttcgaaatgtccggattcgtgatgatactggcgatatt
cgagttgcactatggggtgataaagccgatcttgatatcgatcttgctgactatgtcgtc
tgcaccgatgtcgaaattcaagagggatggcaggatgatcatgaagcctcagctggatgg
cggtcggcggtatacagactcgatgaacgtcctgaagatgcaacaaccacagtagagtca
tcctccaatcaacaacaaacggagacaggcaaggcgtcgggacttgatgcattcgcagaa
acgaacagcgatgagacaacagtgaccgcctcacctacgtctcaggattccaatataaca
tcctccgactcaatgcgcgacaatgctgaccacaatcatgagcaggctgcgtctgatggc
ggtgcctcaaccattgagtctcctcaaacgtctgaggacgacaacacaacagatagtgat
gtcgaatcattcaccggcacagtcgtccaagctggcagtccggttgttcttgataatgga
actgatactcgtcgtgttgagacagacgcgtcattacgacttggcgaagtcgtcaccgtt
agtggctcgacggatggtcagacaattacacccactgagattgaccgctcttcataa
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