Haloquadratum walsbyi C23: Hqrw_1818
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Entry
Hqrw_1818 CDS
T01942
Symbol
rad50
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hwc
Haloquadratum walsbyi C23
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hwc03400
]
Hqrw_1818 (rad50)
DNA repair and recombination proteins [BR:
hwc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hqrw_1818 (rad50)
Archaeal homologous recombinant proteins
Hqrw_1818 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_21
AAA_27
AAA_13
AAA_29
Spectrin_Anc-1
SbcC_Walker_B
AAA_16
ATG14
ABC_tran
Laminin_II
Crescentin
Motif
Other DBs
NCBI-ProteinID:
CCC39747
UniProt:
G0LI27
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All DBs
Position
866523..869219
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AA seq
898 aa
AA seq
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MRFDHITLEHFKPYADASLDLQDGVTIIHGLNGSGKSSLLEACFFALYGARALDETLDDI
VTTDEDDATIELTFSHAGSQYHIKRRLRRSGDRIQTAQCTLDGPDIEIDGATDVRAFITD
ILRMDAEAFVNCAYVRQGEVNKLINATPTQRQAIIDDLLQLGRLEMYRERASDARLGVED
ILSEQRGAQTEIKTQIERKEDANLHEKLNEYEAARADIDAEIERYEENKIRAQETRDNAK
EILTSHEETQEELTELEAEIDDLRMTIEEDESTRADFREAIETKTEQVETLSSARTDALS
SAEVTSADADTLAARRSTLDDKESSIRDSLQTARQQQTMFENQAERLTERVDELESRADE
LQEQASEAETAVTEAKEQITTQQKAQADIEEQMTSVREQFNNSPATLGKATEYLEMLQEE
HDDIRNDLASTRASLSTVQDRRNEAQTLQEAGKCPTCEQPIEESPHVEALDEYDVQIETL
TERLSQLETKQNKVNNKIEAAESLVESERQFETLKERKSLASERIADAREAVNEQTETAA
SLRENAGELETEADEKRDAAATQMSNADSEAEKVATLESKLETINNARDQLDNLAEIQSE
IENIRAEIERLRERREEIADRNDERREYLQAKRDRHAELTADVNEARIEKAQNNHEEAVS
YLEDVSEKLDELRDKRDNIQSQIGSVRGEIENLAELREKHTAINDRVSALETLHEQVETL
SSTYRELRADLRKQNVETLERMLNEVFMLIYDNDAYSRIQLDDAYELTIFQKDETALNPE
QLSGGERALFNLSLRCAIYRLLAEGIDGTAPMPPLILDEPTVFLDSGHVGRLVDLIKDMQ
RRGVAQILIVSHDKELIAAADHLVTVKKDPTSNRSSITRIDDPQRAAISAASSNKTPQ
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttgatcatattaccctcgagcattttaagccgtacgcagacgcgagtttagat
ctccaagacggtgtgacaatcatccatggactaaatggcagcgggaagtcgtcattactc
gaggcctgtttttttgcactttatggtgcacgtgcacttgatgaaacgcttgatgacatt
gtcacaactgatgaagatgatgcaacgattgaactcactttttcacatgctggatcacaa
tatcatatcaagcggcgactccggcgaagtggcgatcgaatacagacagctcaatgtaca
cttgatggtccggatatagaaattgatggagcgaccgacgtcagagcatttatcaccgat
attcttcggatggacgctgaagcctttgttaactgtgcgtatgtgcgccaaggggaggta
aataaacttattaatgcaactccgacgcagcgacaggcaatcattgacgatcttcttcaa
cttggtcgacttgagatgtatcgtgagcgtgcgtccgatgcccgacttggcgttgaggac
attctttctgagcaacgtggtgctcaaaccgagattaaaacacaaatcgagcgaaaagag
gacgccaatttgcatgaaaagctcaatgaatatgaggctgcccgagcagatatcgatgca
gaaattgaacgatatgaggagaataaaatacgggctcaagaaacccgagataacgccaaa
gagattctaacgtcacatgaagaaacacaagaggaactcacagaactagaagccgaaatc
gacgatcttcgcatgaccatcgaagaagatgagtcgacccgcgcagactttcgtgaagca
attgaaacaaagactgaacaggtggagacactctcgtcagcgcgtactgatgcactctca
tctgctgaggttacatcggctgatgcagacacgctcgcagcacgtcggtctactcttgat
gataaggagtcctcaattcgtgactcattgcagacagcacgacagcagcaaacaatgttt
gaaaaccaagctgagaggctaactgagcgggttgatgaacttgaatcgcgcgctgatgag
ctccaagaacaggcttcagaagcagaaaccgcggtcacggaggcgaaagaacaaattaca
actcaacaaaaagctcaagcggacatcgaagagcaaatgacgtcggtgcgtgagcagttc
aataattcgccggcaactctaggtaaagcgacagagtatcttgaaatgcttcaagaagag
catgatgacatccgcaatgatcttgcgtctactcgtgcatcactttcgaccgtccaagac
cgccgtaatgaagcacagacgcttcaagaagctggtaagtgcccaacatgtgaacagcca
attgaggaatcaccacatgttgaggcacttgacgagtatgacgtgcagattgaaacgctt
actgagcgtctcagtcaacttgaaacaaaacagaataaagtaaataataaaattgaagcc
gctgagtccctcgttgaatctgaacgacagtttgagactctcaaagaacgaaaatctctc
gcaagtgaacggattgcagacgcgcgtgaagcggtcaatgagcagaccgagacagcagca
tcactccgcgagaatgcaggcgagcttgagacagaagcggatgaaaaacgggatgcggca
gcaacacagatgtcaaatgctgattcagaagctgaaaaagtggctacattggaatcaaag
ctagagacaatcaataatgctcgcgatcaattggataatcttgcggaaattcaatcagaa
attgagaacataagagcagagatcgagcgcctccgtgagcgacgtgaggaaatcgcagat
cgaaatgatgagcgccgtgaatatctccaagcgaagcgtgaccgtcatgcagaactcact
gcggatgtcaacgaagcacgaattgaaaaagcacagaacaatcatgaagaagcggtctca
tatcttgaggatgtttctgagaaacttgatgaattacgcgacaagcgtgacaatatccaa
agtcaaattggaagtgtccgtggagaaattgaaaatttggctgagcttcgggaaaaacat
acagcaattaatgatcgcgttagtgcgcttgagacgcttcatgagcaagttgaaaccctt
tcatcaacatatcgagaactgagagccgacctccgtaagcaaaatgttgaaacgcttgag
cggatgctaaatgaggtatttatgcttatatacgataatgacgcttattctcgaatccaa
cttgatgatgcatatgagttgactatcttccagaaggatgaaactgctctcaatccagag
caactctcaggtggtgaacgtgcactatttaatctttcattacgttgtgcaatctatcga
ctattagcagagggcatcgacggaacagcaccgatgccaccacttatattagacgagccg
actgtattccttgattccggacatgttggtcgacttgtcgaccttatcaaggatatgcag
cgtcgtggcgtcgcacagattctgattgtgagtcatgataaagaactcattgcggcggca
gatcatcttgtgacagttaaaaaagacccaacaagcaatcgatcatcaatcacgcggatt
gatgacccacagcgggcggcgatcagcgctgcaagctcaaataaaacaccgcaataa
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