Haloquadratum walsbyi C23: Hqrw_2259
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Entry
Hqrw_2259 CDS
T01942
Name
(GenBank) probable DEAD/DEAH box helicase
Organism
hwc
Haloquadratum walsbyi C23
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
PLDc_2
DUF6279
HTH_15
Motif
Other DBs
NCBI-ProteinID:
CCC40144
UniProt:
G0LHB0
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Position
1314571..1318197
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AA seq
1208 aa
AA seq
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MFSNNSWQLTYESGTDDLFTDFYEPFLSEAEQYNRIAGYLSLRGLAAALEGVDSMLETDG
EIRVITGADLQQREREYLLTDTEGTFPNWTKSQLAIIAELFDRGDLSIKVADVSQQTGMF
HSKLGIGVDANDDVLTFEGSINETPNGWLRSYERFKIHRSWKYVEREYVERDRETFDMLW
NDNHSYVDVYELSEADKQDIASWQPDGGQQLQKARETVREGRPENAPSEWELARALSVNG
QTPGGLHLAEDVSTITPWPHQRSISDTVVSHYPSNFILSDEVGLGKTIEVGLTLSRLIQT
GDVETALLLVPASLMEQWQRELRDKFNLNAYRFERQSGYPVVTGSYGDGSSSTVTLSGDV
TASDWSDTPIGGFVDKRDRPTIIIQSWHRARMTGNQQHVAPQTDETVWDATVVDEAHNAR
NPDTKFYKLLGDVRDSSRALYALSATPMQVRIEELHDILRLTELPDSWDDRKQLANFFRT
KMILRETLAEGRIGDSFGDIEREIERTFQRKYADRFDESRHSHIENDLSLEVVRARFEQF
ARMIADHAASYPGYTDYIDQLADTIETDEGMRVRFSLRKQLKRLIDSDERRFVDDPAEIL
YDLDDKLGWRLVVRMSEDMNPVQSRMFRNTREVLRDAKEDGRLDATVPRRDVSTEHVPLD
NEIEELFDEIESYIKNTYQRSTEVLDDQQKAALGFVMTIYRKRLASSFAAIQSTLRSRYN
SLGDKLPDDADELESQVRGSEASEADVRAIVDDETINQYQVSKRKIIQYEQSQIEQFITK
LRSQKTDPKVSKLSSAIDEYREEGYHDIVIFTQYTDTMDDIANELKLLNDVGIFSGDGGS
VYRNHEWVDVGKEGVKKSFADDDGIGILVCTDSASEGLNLQTGELLINYDLPWNPMQVEQ
RIGRIDRIGQENEVVKIVNYAYEDEIDAQIYESLDDKLDIFDQVVGDTRPVLAGIESEIR
DIALKEDTETIEQLTKEKARDADEMSNTMAAVGLTDVEYDTEAALVGWGERTHSALNRIG
SDARRFDPVLTPSIVEYLFTQSSSLETAGWSFQSLRNHERGHEFPEAVREAYLLSIPDES
EVDYLLNQQVDSDEQTAQEVFAEQDALVVTFSTELVNERGSLRLLLPGDPLFAHLLQIID
DNQAMAEENVTLISSNEIDEKLETNRICDVQELIAPVINNRNLTPMDINCYENEKSAKEA
VKRFVYLD
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcaacaatagttggcagttaacatatgaaagcggaactgacgatttattcaca
gatttttatgagccatttttatctgaggcagaacagtacaatcgtattgctgggtatttg
agcctccgggggcttgcagcagcgcttgaaggtgttgactcgatgcttgagacagacggt
gaaattcgtgtgattactggcgctgacctgcaacagcgcgagagagaatatctgttaacc
gataccgagggcacgttccctaactggacaaaatctcagttagccatcatcgccgaacta
tttgatcgaggtgacttgtcaatcaaagttgctgatgtctcacagcagactggtatgttt
cattcaaaacttgggattggggttgacgcgaatgatgatgtgctcactttcgaaggaagc
atcaatgaaacaccgaacgggtggttgcggagttatgagcggttcaaaatacaccgatcg
tggaagtatgtcgagagagaatatgtcgaacgtgatcgggagacattcgatatgttgtgg
aacgataaccactcatatgttgatgtgtatgagttgagcgaagctgacaaacaagatatt
gcgagttggcaacccgacggcgggcaacaactgcagaaagcaagggaaactgttcgtgag
ggacgaccagagaatgccccatcagaatgggagctagcacgtgcactatctgtgaacggt
caaactccaggaggattgcatctcgctgaggatgtgagtacaatcacgccatggccacac
caacggtcgatttcagatactgttgtgagccattatccgagcaatttcattttgagtgat
gaggttggactcggcaagacgattgaggtcgggctgacgctctcacgattaatccagacc
ggcgatgttgagactgcactcttacttgttccagccagtcttatggaacagtggcagcgc
gaattacgtgacaaattcaatctgaacgcctatcgattcgagcgacagagcggatatcct
gtcgttaccgggtcatatggagatggaagcagcagtactgtgacgctcagtggtgatgtg
acagcctccgactggtctgatacaccaattggtgggtttgttgacaagcgtgatcgtccg
actattatcatccaatcgtggcaccgtgcccgcatgactggtaatcaacagcatgtcgcc
ccacaaacagacgagacagtctgggatgcgacagttgtcgatgaagcgcataacgcacgg
aatccggacacgaaattttacaaactgctgggggatgtgcgagacagttcacgagcattg
tatgcactttctgcaaccccgatgcaggttcggattgaggagttgcatgacatacttcga
ttgaccgaattgcctgattcttgggatgaccgcaaacagttggcgaatttcttccgaaca
aaaatgatcctccgtgagacattagccgaaggcagaattggcgattcgtttggcgatatt
gagcgagagattgaacgaacgttccagcgaaagtatgcagaccgatttgacgaatcaaga
cacagtcatattgaaaatgacctctcactcgaagtagtcagagcacgatttgagcagttc
gcaagaatgattgccgatcacgccgcgtcatatccgggctacactgactatattgaccaa
cttgctgatactattgagactgatgaaggcatgcgagtacggttctcactgcgcaagcaa
ttgaagcgattgattgattctgatgagcgtcggtttgttgatgatcctgcggagattctg
tatgatctcgacgacaaactcgggtggagacttgtcgttcggatgtccgaagatatgaat
ccagttcagtcgcgtatgtttcgaaacactcgggaggtgttacgcgatgcgaaagaggac
ggacgtctagacgcgacagtgccacgtcgtgatgtttcgacagagcatgtcccgcttgat
aatgagatagaagagttatttgacgagatcgaatcatacatcaaaaacacgtatcagcgg
tcgacagaagtgcttgatgaccagcagaaagccgctcttggatttgtgatgacaatctat
cgcaagcgattagcgagcagttttgcggctattcagagcacattacggagccgatacaat
tcacttggtgacaaactccctgatgatgctgacgagcttgagtcacaagtacgggggagt
gaggcatcagaagctgacgtgagggcgattgtggatgacgaaacaatcaatcagtatcag
gtgagtaaacgaaagatcatacagtacgagcagtcccaaattgagcagtttattacgaaa
ctccgatcacaaaagaccgatccgaaggtaagcaagttatcgagcgcgattgatgaatat
cgcgaggagggatatcacgatatcgttattttcacacagtatactgacacgatggatgat
atcgcaaatgagctgaagttgctcaacgatgttggcatattcagtggtgatggcggaagc
gtgtacagaaatcacgagtgggttgacgtcggaaaagaaggagtcaaaaaatcatttgca
gatgacgacggaattgggattttggtctgcacagatagtgcaagtgagggactcaacctt
cagacaggcgagctactgatcaattatgatctgccgtggaatccgatgcaggttgagcaa
cgaatcggtcggattgatcgaatcgggcaggaaaatgaggtggtgaagattgtgaattat
gcgtacgaagatgagattgacgctcaaatatatgagagtcttgatgataaactcgatatt
tttgatcaggtcgtcggtgatacgcgacctgtgcttgccggaatcgagtccgaaattcgc
gatatcgcactgaaagaggatacagaaacgattgagcaactgactaaggaaaaagcacgg
gatgctgatgagatgagcaatacgatggccgctgttggactcacggatgttgagtatgat
acggaagctgcacttgttggatggggcgagcggacgcattcagcacttaacagaattgga
agcgatgccagacggtttgatccggtgttgacgccgtctattgttgagtatctatttacc
caaagttcgtcactcgaaactgctggttggtcgtttcagagcctgaggaatcatgagcgt
gggcatgagtttcctgaggcagtacgtgaggcatatctgctgtcaattcctgatgagtca
gaggttgattatctgttgaatcagcaggttgactcggacgagcaaaccgcacaggaggtg
tttgctgagcaggatgctcttgtcgtgacgttctcaacagaacttgtgaatgagcgtggt
tcattgcggttgttattaccaggtgatccgttgttcgcacatctcctccagataatcgac
gataatcaggcgatggctgaggagaatgtgacgctcatttcatccaatgagatagatgag
aaattggagaccaatcggatatgtgatgtgcaggaactaatcgcaccagtgattaataat
cggaatctaacgccaatggatatcaattgttatgaaaatgagaaatcagcaaaggaagct
gtgaagaggtttgtatatctagactga
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