Haloquadratum walsbyi C23: Hqrw_2981
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Entry
Hqrw_2981 CDS
T01942
Symbol
top6B
Name
(GenBank) DNA topoisomerase 6 subunit B (intein-containing)
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
hwc
Haloquadratum walsbyi C23
Brite
KEGG Orthology (KO) [BR:
hwc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hwc03032
]
Hqrw_2981 (top6B)
Enzymes [BR:
hwc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Hqrw_2981 (top6B)
DNA replication proteins [BR:
hwc03032
]
Prokaryotic type
DNA Topoisomerases
Hqrw_2981 (top6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
Top6b_C
Intein_splicing
HATPase_c
HATPase_c_3
HATPase_c_2
Hemerythrin
Motif
Other DBs
NCBI-ProteinID:
CCC40779
UniProt:
G0LLH3
LinkDB
All DBs
Position
2004652..2008566
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AA seq
1304 aa
AA seq
DB search
MTSFQSTLGEEGEIADELAESQRAISIAEFFEKNKHMLGFDSGARGLVTAVKEAVDNALD
ATEEAGIKPDISIEIRESGDYYTLIVEDNGPGITREQVPKVFGKLLYGSRFHAREQSLTP
TQTLLIRRDGDVTFTSIGDFCDSYLPADGPASAPIPVDANIEVPSFDRATHEMTWQPVTN
AIRHRTDERVYRISTACGRTLEITGNHSLFSLSSDNETIEVNAGELSPGDSILAPKQLPM
ASESVDTGTTVDEKTQSSTGAQTQRINILEHIKPDDLKESAATFRIHEADQASLSSGGNH
KSSSASLASSQLASSEVIASAGGQQIQSSADQRQSKEHTPGGDHHNNECLSIKSVCENNK
MSTVADYTLEIVTPDGESSRLPVSVSIDNVFITSLVRYIATASTSDISPVSDSSVDYTTE
ESHNTVDRSFSDTMRPLDSVIPLICEDDGEIELPSFVFESDPKQQQQLLTQLYRYPEASN
GRNAGDDTVTYTTTSATLARQLTTLWNMNGVVATANTQTETSQSDEIKNESAQTTIYEVS
VDRAEIETDIAGSDSDCQQGDGDLCLVSVSSVEEIDAPPYVYDISVPGASGHDENFVTAN
DGAICVKNSRGQQGIGISAAVLYSQLTSGKPARITTRTQSSDTAQYFELIIDTDTNEPEV
SADQERDPGAASLSPTHGTRIELEMEANMRARGQLRDYVKDTAVVNPHARITLDEPGLEE
PRQYERVDGAELPAQTEEIRPHPHGVELGTLLKMLEATESYSVSGFLREEFTRVGSKTAT
KILDQFRDRHFGRALPMSAPETIPDNADDTDDEQVTSSLESIIEAAVVNKGASATTTFAS
RVAETVNQRSGTTQGELVGIVDTVAEDIEDEFETTFGTTVRENAVEAAWDVLTTDIDEDI
YPLVADATSTQKDHETVRGVTDRIATKFADGSEPLRATRDAVREYVDRSADMIVSEEVSF
GETARENVVDAVWTAMQTVDDELPAVKAVADDRNIASDLLEAMRLTDILAPPTDCLSPIT
ADLVEAGLRKEFDADFYAAATRDAEVHGGDPFIVEAGIAYGGELEGGKISLLRFANRVPL
VYQRGACATTDVIKSIGWRNYGLDQPGGSGMPNGPAVVMIHVASTNVPFTSESKDALANI
PAIEDEIELAVREASRELKSYLNKRRSMQKRREKQDVLGRILPEMANKLADVTENDRPDI
DNALARIMNNVSVERDVDNGSVTLTVQNYSDRQESPTLTDIVDSKPDTIPDKIEIVELED
EYFLTWEPVVDAGESATVTYEVPTGASFELDVDDVETEKLTIDA
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgtttcagtcgacactcggcgaagagggcgagattgccgacgagttggcggag
agccagcgggcaatctcaatcgccgagttctttgaaaagaacaaacatatgttgggcttc
gattcaggagctcgagggcttgtcaccgctgttaaggaggcagttgataatgctcttgat
gcgaccgaagaagccgggattaagccggatatctcaattgaaattcgtgagtctggcgat
tattatactcttattgttgaagacaacggtccaggaataacccgcgaacaggtgccgaaa
gtctttggaaagctactgtatggatcacgattccatgcccgtgaacagtcgttgacacca
actcaaacgcttcttatccgtcgtgatggcgatgtgacgtttacttcaatcggcgacttt
tgtgactcatatctccctgcggatggaccagcatcagctcccattccagtagacgccaat
attgaggtgccatcatttgaccgagcaacgcatgaaatgacatggcagccggtgaccaat
gcgattcgtcatcgaacagatgagcgtgtatatcgaatttcaacagcatgcggtcgaacg
cttgagataacgggtaatcatagtctgttttcactttcttctgataatgagacaatagag
gtgaatgccggcgagctttcaccgggcgatagcattcttgcaccaaagcaactcccgatg
gcttcagagtctgtggataccggtacgaccgtagatgaaaaaacacaatcgagtacggga
gcacagacacagagaatcaatattcttgaacatatcaaaccggatgacctcaaagagtct
gcagcaacgttccggatccacgaagccgaccaagcgtctctctcttcaggcggaaatcat
aaatcttcatctgcttcgttggcgtcatcacagctggcatcgagtgaggtcatagcatcc
gccggcggacagcagattcagtccagtgcagatcagcgacaatcaaaagaacacacaccc
ggtggtgatcatcataacaacgagtgcctgtcgatcaaatcggtatgtgaaaacaataaa
atgtccacagtcgctgattatacccttgagattgttactccagatggtgaatcatcacga
ttgccggtctcagtttctatcgataatgtgtttattacctctcttgtgagatacattgca
acagcatccacatcagatatatcgccggtatctgatagtagtgtagattatactacagaa
gagagtcataatacggtggatcggtcctttagcgacacgatgagaccacttgattcggtg
attccgctcatttgtgaggatgatggggagatagaacttccatcgtttgtctttgaatct
gacccgaagcaacaacaacagttattgactcagttgtatcgatatcccgaagcatcaaac
ggaagaaatgctggtgatgatacggtaacatatacgacaacaagtgctacgcttgcaagg
cagctcaccacgttatggaatatgaatggtgtagtcgcgacagcgaatacgcagacagag
acatcacagtccgatgagatcaaaaatgaaagcgcacaaacaacgatatatgaagtatca
gtcgatcgggctgagattgagactgatatagctggctccgattcagactgccagcagggt
gatggcgatctttgtttggtatcagtgagtagtgttgaggagattgacgcaccaccatat
gtatacgatatttcggtgcctggtgcaagcggtcatgatgagaactttgtgactgcaaat
gacggggcaatttgcgtcaaaaatagtcgtggacagcagggtattggaatttctgcagca
gtgctgtactcacaacttacctcagggaagccagcaaggataaccacacgaacacagagt
tccgatacagcacagtattttgagctcatcattgatacagacacaaacgaacctgaggtg
agcgctgaccaggagcgtgaccctggtgctgcatcattatcaccgacacatggcacgcgg
attgagctagagatggaggcaaatatgcgagctcgcggacaacttcgtgattatgtgaaa
gacacagcggttgtgaatccacatgcacggatcacgcttgatgaacctgggcttgaggag
cctcgccagtacgagcgagtcgacggcgccgaactgccggcacaaactgaggaaattcga
ccacatccacacggtgttgaactaggaacactactgaaaatgcttgaagcaacggagtca
tactctgtgtcaggcttccttcgtgaggagttcacccgcgttgggtcaaaaacggcaaca
aagatccttgatcaatttcgcgaccgtcactttggtcgggcacttcctatgtccgcgcca
gaaacgataccagacaatgctgacgacactgatgatgagcaagtaacctcatcgcttgag
tccatcattgaagctgcggtcgtaaacaaaggtgcatctgcaactaccacgtttgcaagc
cgcgtcgcagagacagttaatcaacgatctggaacgacacagggcgaacttgtcgggatt
gttgatacggttgcagaggacattgaagatgagtttgagacaacattcggtacgaccgtt
cgagagaatgcagttgaggcggcatgggatgtcctaaccacagatattgatgaagatatc
tacccgcttgttgcggatgcaacaagcacgcaaaaagatcatgaaacagttcgaggtgtt
acagaccggattgcaacaaaattcgctgatggctccgaaccccttcgtgcgacccgagac
gcagttcgtgagtatgtcgatcgatcagcagatatgattgtctctgaggaggtgtcattt
ggcgaaactgcccgtgaaaacgtggtcgatgcggtatggacggcgatgcagactgttgat
gatgagttaccagcagtcaaggctgttgcagacgaccgtaatatcgcctcggatttgctt
gaagcaatgcgattaacagatatcttggcgccaccaacagattgtctatcgccgattaca
gcagatctcgttgaggcagggttacgaaaggagtttgatgccgatttctatgcggctgca
acccgagatgcggaggttcacgggggtgatccatttattgttgaggctgggattgcctat
ggtggtgaactcgagggtggaaaaatctcgcttctccgatttgcaaatcgagtcccattg
gtttatcaacggggtgcatgtgcaacaacagatgtgattaaatcaattggatggcgaaac
tatggacttgatcaacccggtgggtctggaatgccgaatggaccagcagtggtgatgatt
cacgtggcatcgacaaatgtgccattcacgagtgagtcaaaggatgcacttgcaaatatc
ccagccattgaagacgaaattgaacttgcagttcgagaagcctcacgcgaactaaaatca
tatctcaacaagcgccgatcaatgcaaaaacggcgagaaaaacaggatgtgcttgggcgg
attcttccagagatggcaaacaaactcgcagacgtaacagagaatgaccgcccagatatt
gacaatgcactagcacgaatcatgaataatgtcagtgttgagcgtgatgtggataacggg
tcagttacattaacagtgcagaattactcagatcgtcaggaatcaccaacgctgactgat
attgttgattccaagccggatactattccagataaaatcgaaattgtcgaacttgaggat
gaatacttcctgacgtgggagccagtcgttgacgctggtgagtcggctactgtgacatat
gaagttccgacgggtgcgtcatttgagcttgatgtcgacgatgttgaaaccgagaaacta
accattgacgcatga
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